DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkp3 and ynbD

DIOPT Version :10

Sequence 1:NP_001262031.1 Gene:Mkp3 / 40081 FlyBaseID:FBgn0036844 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_415929.1 Gene:ynbD / 945985 ECOCYCID:G6730 Length:430 Species:Escherichia coli


Alignment Length:122 Identity:35/122 - (28%)
Similarity:59/122 - (48%) Gaps:24/122 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 VLNVTPDLPNKFKESGDIKYLQIPITDHYSQDLAI----HFPDAIQFIEEARSASSVVLVHCLAG 305
            ||:||.:.| :.:.:.|..|..:|:.     ||.:    ....|:..:|..|.....|||||..|
E. coli   321 VLDVTFEFP-RGRATKDRLYFCVPML-----DLVVPEEGELRQAVAMLETLREEQGSVLVHCALG 379

  Fly   306 VSRSVTVTLAYLM---HTRGLSLNDAFAMVRDRKPDVSPNFHFMQQLLSFESQLRLR 359
            :|||..|..|:|:   |.:  ::|:|.:.:|.|:|.:         :|:.|.:..||
E. coli   380 LSRSALVVAAWLLCYGHCK--TVNEAISYIRARRPQI---------VLTDEHKAMLR 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkp3NP_001262031.1 DSP_MapKP 8..148 CDD:238723
DSP_MKP_classII 215..352 CDD:350414 32/113 (28%)
ynbDNP_415929.1 PAP2_Aur1_like 47..197 CDD:239481
DSP_bac 295..429 CDD:350376 35/122 (29%)
Blue background indicates that the domain is not in the aligned region.

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