DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mkp3 and ssh2a

DIOPT Version :9

Sequence 1:NP_001262031.1 Gene:Mkp3 / 40081 FlyBaseID:FBgn0036844 Length:497 Species:Drosophila melanogaster
Sequence 2:XP_005157728.1 Gene:ssh2a / 325085 ZFINID:ZDB-GENE-030131-3810 Length:1175 Species:Danio rerio


Alignment Length:537 Identity:113/537 - (21%)
Similarity:189/537 - (35%) Gaps:165/537 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LILLDCRGSHEYSESHIRG----------AVNLCIP--SIVLRRL---------AVGKIDLASTI 69
            ::::...|..:..||.:.|          .|.|.:|  |..|..|         .|.::.:...:
Zfish   117 MVIISTNGRQDTEESVVLGMDFSNSDRTCTVGLVLPLWSDTLIHLDGDGGFSVSTVNRVHVFKPV 181

  Fly    70 KSPELKQRIQSGYKLCWFILYNGEGVPGQNQEIAGA-----GSLAVAMDSIISILHRRLKQDGCR 129
            ....:...:||.:|:|               |:|..     |||.:..   :|....|:..|   
Zfish   182 SVQAMWSALQSLHKVC---------------EVARCHNYYPGSLFLTW---VSYYQSRVTSD--- 225

  Fly   130 VVALQDGFNNFRQAFPEW-CEDDNQTHS-------KEIESSRNVQTDQLMGLRSLRISTTQSDSA 186
                       :....|| ...|.|:|.       .::.:.|. :|::|:..| ||....|.|  
Zfish   226 -----------QHCINEWNAMQDVQSHRADSPVLFTDVPTERE-RTERLIKTR-LREIMMQKD-- 275

  Fly   187 CSSSAESSDCESSSHHHHHHSHHNYNE--------------APVEIIPGLLFLGNATHSCDSEAL 237
             ..:..|.:..:........:...:.|              :|.||... ::||:..::.:.|.|
Zfish   276 -LENVTSKEIRTELEMQMVCNLREFKEFIDNEMIVILGQMDSPTEIFDH-VYLGSEWNASNLEEL 338

  Fly   238 KKYNIKYVLNVTPDLPNKFKESGDIKYLQIPITDHYSQDLAIHFPDAIQFIEEARSASSVVLVHC 302
            :...::|:||||.::.|.|  .|..:|..|.:.|..:.:|..::.|..:||.:|:.|....||||
Zfish   339 QNSGVRYILNVTREIDNFF--PGLFEYHNIRVYDEEATNLLEYWNDTYKFISKAKKAGVKCLVHC 401

  Fly   303 LAGVSRSVTVTLAYLMHTRGLSLNDAFAMVRDRKPDVSPNFHFMQQLLSFE-------------- 353
            ..|||||.:..:||.|...|..|:.||..|::|:....||..||:||..::              
Zfish   402 KMGVSRSASTVIAYAMKEYGWDLDRAFDHVKERRSVTKPNPSFMKQLEEYQGILLASKQRHNKLW 466

  Fly   354 ---SQLRLRPGSRFSCSCIAPDCNCMQTTGFMATHLANATGVSPDSGIEFDRWTP--SDTGLKXE 413
               |...|..|....|.                         :|.|   .||..|  ::..|..:
Zfish   467 RSHSDTDLSDGHEPLCK-------------------------TPRS---LDRSDPHNNNGSLSIQ 503

  Fly   414 QSGGKSFVLPPSQEVPFAAAATSPLPMC------------------LAVNPDNMSPASTTSSSTS 460
            |..|          :....:.|:|.|:.                  |.:.|.:...|:|..|...
Zfish   504 QMLG----------IAVLESLTNPRPVACNTHKKSGETPSKLAHEDLFLLPQSRQRAATVGSKQR 558

  Fly   461 TTTTAEAVSVVEMVQHR 477
            .:|...||.  |.|.||
Zfish   559 NSTLILAVR--EPVSHR 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkp3NP_001262031.1 DSP_MapKP 8..148 CDD:238723 25/148 (17%)
DSPc 215..353 CDD:238073 48/137 (35%)
CDC14 <242..359 CDD:225297 42/133 (32%)
ssh2aXP_005157728.1 SSH-N 12..245 CDD:212166 28/159 (18%)
DEK_C 260..311 CDD:285919 8/54 (15%)
DSPc 317..452 CDD:238073 48/137 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2281
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.