DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mkp3 and Dusp18

DIOPT Version :10

Sequence 1:NP_001262031.1 Gene:Mkp3 / 40081 FlyBaseID:FBgn0036844 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001013146.2 Gene:Dusp18 / 305477 RGDID:1306929 Length:204 Species:Rattus norvegicus


Alignment Length:156 Identity:55/156 - (35%)
Similarity:78/156 - (50%) Gaps:12/156 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 YNEAPVEI----IPGL------LFLGNATHSCDSEALKKYNIKYVLNVTPDLPNKFKESGDIKYL 265
            ::..||:.    |.||      ||:.|...:.|...|....|..|:||:.::.|.|.|  ||:|:
  Rat     5 WSACPVQFPQPSISGLSQITKSLFISNGAAANDKLLLSSNQITTVINVSVEVANTFYE--DIQYV 67

  Fly   266 QIPITDHYSQDLAIHFPDAIQFIEEARSASSVVLVHCLAGVSRSVTVTLAYLMHTRGLSLNDAFA 330
            |:|:.|.....|:..|......|..........|:||.||||||..:.|||||....:||.||.|
  Rat    68 QVPVVDAPIARLSDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHA 132

  Fly   331 MVRDRKPDVSPNFHFMQQLLSFESQL 356
            ..:.|:|.:.||..|.:||:.:|.||
  Rat   133 WTKSRRPIIRPNSGFWEQLIHYEFQL 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkp3NP_001262031.1 DSP_MapKP 8..148 CDD:238723
DSP_MKP_classII 215..352 CDD:350414 52/146 (36%)
Dusp18NP_001013146.2 DUSP18_21 19..176 CDD:350421 52/142 (37%)
Sufficient for mitochondrial localization. /evidence=ECO:0000250 95..141 21/45 (47%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.