DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkp3 and Ssh2

DIOPT Version :9

Sequence 1:NP_001262031.1 Gene:Mkp3 / 40081 FlyBaseID:FBgn0036844 Length:497 Species:Drosophila melanogaster
Sequence 2:XP_038941949.1 Gene:Ssh2 / 303342 RGDID:1309389 Length:1450 Species:Rattus norvegicus


Alignment Length:477 Identity:102/477 - (21%)
Similarity:176/477 - (36%) Gaps:137/477 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PETEHETCSKEWLQSQLRSLDSKDLILLDCRGSHEYSESH----------------------IRG 44
            |.|....|:.   .|.|...:|..|:..:|..|..:|:.:                      ::|
  Rat    12 PSTTSSPCAS---SSYLEDSESAALLCCECGESEIFSDFNEADSGEEECRSQPRSISESFLTVKG 73

  Fly    45 AV-------NLCIPSIVLRR-LAVGKIDLASTIKS------PE----LKQRIQSGY--KLCWFIL 89
            |.       ....|.|..|| ...|  ||...:::      ||    |..|::|.|  :..:.::
  Rat    74 AALFLPRGNGSSTPRISHRRNKHAG--DLQQHLQAMFILLRPEDNIRLAVRLESTYQNRTRYMVV 136

  Fly    90 YNGEGVPGQNQEIA------------------------------GAGSLAVAMDSIISI------ 118
            .:..|.....:.|.                              |.|..:|:.|:.:.|      
  Rat   137 VSTNGRQDTEESIVLGMDFSSNDSSTCTMGLVLPLWSDTLIHLDGDGGFSVSTDNRVHIFKPVSV 201

  Fly   119 ---------LHRRLKQDGCRVVALQDGF----------------NNFRQAFPEW-CEDDNQTHS- 156
                     ||:     .|.|..:.:.:                |:.:.:..|| ...|.|:|. 
  Rat   202 QAMWSALQSLHK-----ACEVARMHNYYPGSLFLTWVSYYESHINSDQSSVNEWNAMQDVQSHRP 261

  Fly   157 ------KEIESSRNVQTDQLMGLRSLRISTTQSDSACSSSAE-------SSDCESSSHHHHHHSH 208
                  .:|.:.|. :|::|:..: ||....|.|....:|.|       ...|..........:.
  Rat   262 DSPALFTDIPTERE-RTERLIKTK-LREIMMQKDLENITSKEIRTELEMQMVCNLREFKEFIDNE 324

  Fly   209 H----NYNEAPVEIIPGLLFLGNATHSCDSEALKKYNIKYVLNVTPDLPNKFKESGDIKYLQIPI 269
            .    ...::|.:|... :|||:..::.:.|.|:...::|:||||.::.|.|  .|..:|..|.:
  Rat   325 MIVILGQMDSPTQIFEH-VFLGSEWNASNLEDLQNRGVRYILNVTREIDNFF--PGVFEYHNIRV 386

  Fly   270 TDHYSQDLAIHFPDAIQFIEEARSASSVVLVHCLAGVSRSVTVTLAYLMHTRGLSLNDAFAMVRD 334
            .|..:.||..::.|..:||.:|:...|..||||..|||||.:..:||.|...|.:|:.|:..|::
  Rat   387 YDEEATDLLAYWNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKEYGWNLDRAYEYVKE 451

  Fly   335 RKPDVSPNFHFMQQLLSFESQL 356
            |:....||..||:||..::..|
  Rat   452 RRTVTKPNPSFMRQLEEYQGIL 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkp3NP_001262031.1 DSP_MapKP 8..148 CDD:238723 37/243 (15%)
DSPc 215..353 CDD:238073 48/137 (35%)
CDC14 <242..359 CDD:225297 42/115 (37%)
Ssh2XP_038941949.1 SSH-N 38..263 CDD:212166 35/231 (15%)
DEK_C 277..329 CDD:400903 9/52 (17%)
DSP_slingshot_2 332..475 CDD:350417 49/145 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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