DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkp3 and lip-1

DIOPT Version :9

Sequence 1:NP_001262031.1 Gene:Mkp3 / 40081 FlyBaseID:FBgn0036844 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001293707.1 Gene:lip-1 / 191704 WormBaseID:WBGene00003043 Length:381 Species:Caenorhabditis elegans


Alignment Length:416 Identity:127/416 - (30%)
Similarity:197/416 - (47%) Gaps:68/416 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPETEH--ETCSKEWLQSQLRSLDSKDLILLDCRGSHEYSESHIRGAVNLCIPSIVLRRLAVGKI 63
            :|.|..  |..|.|...   |....:::|:||||.:.:..:...|...:|.:|:::.|||..|.:
 Worm     5 LPSTSQNGEEISAEQFN---RIFHERNVIVLDCRSNGDSVKRANRFFCSLRLPALLQRRLMGGSM 66

  Fly    64 DLASTIKSPELKQRIQSGYKLCWFILYNGEGVPG---QNQEIAGAGSLAVAMDSIISILHRRLKQ 125
            .| ||:  |:||. :.:....|..:|.    :||   |:::::.|             |.|.||.
 Worm    67 RL-STV--PDLKD-LNNSPDQCPEVLL----IPGDSEQDEQLSAA-------------LARNLKS 110

  Fly   126 DGCRVVALQDGFNNFRQAFPEW--CEDDNQTHSKEIE------SSRNVQTDQLMGLRSLRISTTQ 182
            :..|...|.:........||..  ..|:|...:.::.      |.:...:..|:.|..||:    
 Worm   111 NHYRHFVLGEPVKTLLSQFPTLRDAADENWNTTFQMNSMPGQASGQQASSGPLLNLNQLRL---- 171

  Fly   183 SDSACSSSAESSDCESSSHHHHHHSHHNYNEAPVEIIPGLLFLGNATHSCDSEALKKYNIKYVLN 247
                     |..|          .......|.||: :...|:||||..:.:.:.||||:|.:|:|
 Worm   172 ---------EGED----------QGGKQRAEFPVK-LTNFLYLGNAETAKNRDVLKKYSISHVIN 216

  Fly   248 VTPDLPNKFKESGDIKYLQIPITDHYSQDLAIHFPDAIQFIEEARSASSVVLVHCLAGVSRSVTV 312
            ||.:|||.|:|..:::||:|...|:.|.:|...||:||.||::||...|..|||||||:|||||:
 Worm   217 VTSNLPNTFEEDPNMRYLRISADDNASHNLTKFFPEAISFIDDARRNDSACLVHCLAGISRSVTI 281

  Fly   313 TLAYLMHTRGLSLNDAFAMVRDRKPDVSPNFHFMQQLLSFESQLRL---RPGSRFSCSCIAPDC- 373
            .|||||.|...:|:.|:..|:.|...::||||||.||..:|..|.|   |.|:..|.:..:|.| 
 Worm   282 CLAYLMKTEMCTLDSAYEWVQKRNASIAPNFHFMGQLTDYEKMLGLNSNRVGTYPSSAPRSPSCA 346

  Fly   374 ---NCMQTTGFMATHLANATGVSPDS 396
               ..:...|.:.|....:...||.|
 Worm   347 IEAAAVSQVGGLLTPPPTSCSASPQS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkp3NP_001262031.1 DSP_MapKP 8..148 CDD:238723 35/144 (24%)
DSPc 215..353 CDD:238073 66/137 (48%)
CDC14 <242..359 CDD:225297 58/119 (49%)
lip-1NP_001293707.1 DSPc 185..322 CDD:238073 66/137 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159041
Domainoid 1 1.000 134 1.000 Domainoid score I3125
eggNOG 1 0.900 - - E2759_KOG1717
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 152 1.000 Inparanoid score I2951
Isobase 1 0.950 - 0 Normalized mean entropy S2795
OMA 1 1.010 - - QHG52370
OrthoDB 1 1.010 - - D389486at33208
OrthoFinder 1 1.000 - - FOG0002164
OrthoInspector 1 1.000 - - oto18388
orthoMCL 1 0.900 - - OOG6_107960
Panther 1 1.100 - - LDO PTHR10159
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X468
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.720

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