DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfxn2 and sfxn5b

DIOPT Version :9

Sequence 1:NP_649086.2 Gene:Sfxn2 / 40080 FlyBaseID:FBgn0036843 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001025334.2 Gene:sfxn5b / 561995 ZFINID:ZDB-GENE-050706-107 Length:325 Species:Danio rerio


Alignment Length:324 Identity:126/324 - (38%)
Similarity:184/324 - (56%) Gaps:20/324 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KPLFDLSTFAGRFQYFAWMTDPRTVVVSSDRLLEAKAMVERYRKGDQSPPLKPEEVHYNMKLYNS 76
            ||.|:.|||.||.::|..:.||.|:.|:..||.|...:::.:::|:....:..:::....|:..:
Zfish    14 KPRFEQSTFLGRLRHFIDIIDPSTLFVTESRLKECMKLLDDFKRGNLPAGVTDQQLWEAQKVKQA 78

  Fly    77 AFHPDTGELQNFCGRMSFQVPGGMLITGGMLAFYRTVPAVVLWQFINQSFNAVVNYTNRNANSPT 141
            ..||||||......|||..||.|..|..|:|...:|:.:.|.||::|||.||.|||.||||..||
Zfish    79 IIHPDTGEKIFMPFRMSGYVPFGTPIVVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPT 143

  Fly   142 SVTQLGVAYVSATTSALVAAIGC-----KNYWSKKATPLF-QRFVPFAAVAAANFVNIPLMRQNE 200
            ..::....||.|.|||:..|:|.     |:.....||.|| |||:||.|||:||..|:.|||.||
Zfish   144 PTSKFIQGYVGAVTSAVSIAVGLNVLIQKSSKFNPATRLFIQRFIPFPAVASANICNVALMRHNE 208

  Fly   201 IINGIEVKNDDGVVVGQSRLAAIKGIGEVVVSRIAMAAPGMLVLPLIMERLEKLPAYRRIKWINA 265
            :..||:|.:.||.|||.||:||...:.|..::|:|:..|..::.|:||..|||||..:..:.:..
Zfish   209 LSEGIDVLDSDGNVVGSSRIAAKHALIETALTRVALPLPIFVLPPIIMAFLEKLPLLQARRRLML 273

  Fly   266 PFQTLLVGCFLCF--MVPTACALFPQQCSLDTSIMRTFEPELYEDLEKKTQGKVPKRVYFNKGL 327
            |..:|:  |.|.|  .:|.|.:||||...::.|.:   |||    :...|..||   :.:||||
Zfish   274 PVHSLV--CLLVFGLSLPLAISLFPQMSEIEASHL---EPE----IAMATDCKV---LTYNKGL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn2NP_649086.2 Mtc 15..327 CDD:309082 122/319 (38%)
sfxn5bNP_001025334.2 Mtc 17..325 CDD:309082 122/319 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3767
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53494
OrthoDB 1 1.010 - - D340335at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.830

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