DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfxn2 and sfxn1

DIOPT Version :9

Sequence 1:NP_649086.2 Gene:Sfxn2 / 40080 FlyBaseID:FBgn0036843 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001016244.1 Gene:sfxn1 / 548998 XenbaseID:XB-GENE-970145 Length:322 Species:Xenopus tropicalis


Alignment Length:320 Identity:167/320 - (52%)
Similarity:220/320 - (68%) Gaps:6/320 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IDVDKPLFDLSTFAGRFQYFAWMTDPRTVVVSSDRLLEAKAMVERYRKGDQSPPLKPEEVHYNMK 72
            |::.:|.:|.|||.||.::|..:||||.:::|:|:|..|:.::..||:|...|.|..:|:.....
 Frog     9 INIKEPRWDQSTFVGRAKHFFTVTDPRNILLSNDQLERARQIIHDYRQGTVEPGLTEDELWRAKY 73

  Fly    73 LYNSAFHPDTGELQNFCGRMSFQVPGGMLITGGMLAFYRTVPAVVLWQFINQSFNAVVNYTNRNA 137
            :|:|||||||||.....||||.|||..|.|||.|:.||||.||||.||:|||||||:||||||:.
 Frog    74 VYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVVFWQWINQSFNAIVNYTNRSG 138

  Fly   138 NSPTSVTQLGVAYVSATTSALVAAIGCKNYWSKKATPLFQRFVPFAAVAAANFVNIPLMRQNEII 202
            ::|.:|:|||.|||||||.|:..|:|. |..:|..:||..||||||||||||.:|||||||.|:.
 Frog   139 DAPITVSQLGTAYVSATTGAVATALGL-NALTKHVSPLIGRFVPFAAVAAANCINIPLMRQRELK 202

  Fly   203 NGIEVKNDDGVVVGQSRLAAIKGIGEVVVSRIAMAAPGMLVLPLIMERLEKLPAYRRIKWINAPF 267
            .||.|.:::|..:|:|..||.:.|.:||||||.||||||.:.|.||..|||....:|..|::||.
 Frog   203 YGIPVTDENGNRIGESPNAAKQAISQVVVSRILMAAPGMAIPPFIMNALEKKAFLKRFPWMSAPI 267

  Fly   268 QTLLVGCFLCFMVPTACALFPQQCSLDTSIMRTFEPELYEDLEKKTQGKVPKRVYFNKGL 327
            |..|||..|.|..|..||||||:.|:  |:.| .||||...:::.:.|.  :||||||||
 Frog   268 QVGLVGFCLVFATPLCCALFPQKSSM--SVTR-LEPELQAKIKENSPGL--ERVYFNKGL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn2NP_649086.2 Mtc 15..327 CDD:309082 163/311 (52%)
sfxn1NP_001016244.1 Mtc 16..322 CDD:367676 163/311 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D340335at33208
OrthoFinder 1 1.000 - - FOG0000786
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X842
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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