DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfxn2 and Sfxn4

DIOPT Version :9

Sequence 1:NP_649086.2 Gene:Sfxn2 / 40080 FlyBaseID:FBgn0036843 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_006231746.1 Gene:Sfxn4 / 361778 RGDID:1306088 Length:316 Species:Rattus norvegicus


Alignment Length:328 Identity:81/328 - (24%)
Similarity:130/328 - (39%) Gaps:69/328 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LSTFAGRFQYFAWMTDPRTVVVSSDRLLEAKAMVERYRKGDQSPPLKPEEV--HY--NMKLYN-- 75
            |.:|..||..:..:.||..|.:|.:.:.:::.::           ...|:.  ||  |.::.:  
  Rat    15 LQSFFRRFCQWMDLLDPVNVFISVESIEKSRQLL-----------FTTEDAPKHYLDNQRVKDAW 68

  Fly    76 ----SAFHPDTGELQNFCGRMSFQVPGGMLITGGMLAFYRT----VPAVVLWQFINQSFNAVVNY 132
                |..|||:.:|.....|.:..:|    :|..|:.....    :.:::|.|.....:....|.
  Rat    69 NKSLSTVHPDSSKLIPHLFRPAAFLP----VTAPMVLLMMMPDTGIKSIILTQGCLYGYTTAFNI 129

  Fly   133 TNRNA---NSPTSVTQLGV-AYVSATTSALVAAI-----GCKNYWSKKATPLFQRFVPFAAVAAA 188
            ||.||   :.|...|.||. .:.|:|....:..:     ...|.|.|       ||:|...:|..
  Rat   130 TNGNASYSHGPVERTLLGAGVFASSTFFGSIPHLFQLKYPLNNLWLK-------RFLPIIFLAQI 187

  Fly   189 NFVNIPLMRQNEIINGIEVKNDDGVVVGQSRLAAIKGIGEVVVSRIAMAAPGMLVLPLIMERLEK 253
            :.:|:...|..|...||||.:.:|.|:|.||.|..|.|.|...||..:.....|...|.:...::
  Rat   188 SGMNVFASRSFENHRGIEVMDKEGHVIGYSRKAGRKAIKETAKSRAVLFGTSALAPELFIHIFKR 252

  Fly   254 LPAYRRIKWINAPFQTLLVGCFL---------CFMVPTACALFPQ----QCSLDTSIMR--TFEP 303
            ...|.         ||||....|         ..|||.:.::|||    |||....::|  |.|.
  Rat   253 TRFYP---------QTLLASVILRMSSTLFMMGLMVPVSFSMFPQIGQIQCSQLEEMIRSSTEEK 308

  Fly   304 ELY 306
            ||:
  Rat   309 ELF 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn2NP_649086.2 Mtc 15..327 CDD:309082 81/328 (25%)
Sfxn4XP_006231746.1 Mtc 15..315 CDD:281771 81/328 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3767
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D881974at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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