DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acp76A and srp-6

DIOPT Version :9

Sequence 1:NP_524153.1 Gene:Acp76A / 40078 FlyBaseID:FBgn0015586 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_504890.1 Gene:srp-6 / 179125 WormBaseID:WBGene00005647 Length:375 Species:Caenorhabditis elegans


Alignment Length:381 Identity:74/381 - (19%)
Similarity:147/381 - (38%) Gaps:87/381 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QQNVSFQLIREIDRYTPENFVLSVLNIEMILFEIHAAKAVESNNDLERSLIINFGYSEARQEV-- 84
            |||::            |:||.|.|:|.:.|..:|.|...|:.:::.::|:......|..|..  
 Worm    27 QQNLT------------ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSN 79

  Fly    85 LDWGL----RYKKASSAKFQMANKVAVSQKLPLSQKLRLVNEVLMTSAKKYDVTKDVRPSKLMDE 145
            :..||    :..:.:.|....:.|....:||.|:...:|.|    ..|.:.:.......::.::.
 Worm    80 ISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYN----AGASQLNFEDQEASAEAINN 140

  Fly   146 WLSSHLDGVLANFVQEKKLNAGENIVAI--SGMTVTPLWASHFQSE--INRYFVNNPGTGYASKD 206
            ::|.:..|.:...:....::  |.:||:  :.......|.:.|:.|  ..|.|.::..    ||.
 Worm   141 FVSENTKGHIKKIINPDSIS--EELVAVLTNAFYFKANWQTKFKKESTYKREFFSSEN----SKR 199

  Fly   207 PTCVPMMHSLSSFETMSTD-EAKGIYIPFSSANLGMLILLPR------------KGVTCKDILDN 258
            .|  ..:||.:|....|.: :.:.:.:|:...:..:.|.||:            ..||.:.::.|
 Worm   200 ET--EFLHSRNSNRKYSENGQFQVLSLPYKDTSFALSIFLPKTRFGLSEALQNLDSVTIQQLMSN 262

  Fly   259 LNNQINVEYNDHKDVHLLLPIFKEKFDYNIAKFFNGINIEDTFKDSAFKSKAKIKINNFRVNHGI 323
            .:|.:         |::.:|.:|.:....:.:....:.||..|.|||       .::||.  .||
 Worm   263 TSNTL---------VNIAMPKWKIETALGLNRALMAVGIEKAFTDSA-------DLSNFA--DGI 309

  Fly   324 RFQPILR---LEVVDDIDTGKTET------------------FEVNRPFVFVI-KD 357
            .......   :||.:|.......|                  |..:.||:|:: ||
 Worm   310 YISQAAHKALIEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILSKD 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp76ANP_524153.1 SERPIN 22..367 CDD:294093 74/381 (19%)
srp-6NP_504890.1 serpinL_nematode 16..374 CDD:381047 74/381 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.