DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acp76A and srp-2

DIOPT Version :9

Sequence 1:NP_524153.1 Gene:Acp76A / 40078 FlyBaseID:FBgn0015586 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:370 Identity:78/370 - (21%)
Similarity:146/370 - (39%) Gaps:63/370 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TIQQNVSFQLIREIDRYTPENFVLSVLNIEMILFEIHAAKAVESNNDLERSLIINFGYSEARQEV 84
            |.|.:.:.:|:..:..  ..:.|||.|:|.:.|..|||.....:..:||..|    |.|...:|.
 Worm     6 TSQTDFALKLLATLPH--SGSVVLSPLSISLGLALIHAGACGSTQKELEDVL----GGSRIFEEF 64

  Fly    85 ---------LDWGLRYKKASSAKFQMANKVAVSQKLPLSQK-LRLVNEVLMTSAKKYDVTKDVRP 139
                     .|.|:..|        :.|:|.|:|...:.|. |..|.::...|.:..|.::..:.
 Worm    65 SGLMEAVGDTDNGVETK--------IVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQA 121

  Fly   140 SKLMDEWLSSHLDGVLANFVQEKKLNAGENIVA--ISGMTVTPLWASHF--QSEINRYFVNNPGT 200
            :|.|:.::.:|.:|.:.:.:.....|   |..|  ::.|.....|.|.|  :|...|.|..    
 Worm   122 AKTMNTFVENHTNGKIKDLIPADSAN---NAFAFLVNAMYFKADWQSKFAKESTTGREFFT---- 179

  Fly   201 GYASKDPTCVPMMHSLSSFETMSTDEA-KGIYIPFSSANLGMLILLPRKGVTCKDILDNLNNQ-I 263
              :..:...:|.:..|......:.|.. :.:.:.::.....:.|.||::.....|.|:.:|.: |
 Worm   180 --SEAESRQIPFLTELDEHRDYTEDVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALEKINGEYI 242

  Fly   264 NVEYNDHKD--VHLLLPIFKEKFDYNIAKFFNGINIEDTFKDSAFKSKAKIKINNFRVNHGIRFQ 326
            ....||.|.  |.:.:|.||.:.:.::.:....|.|::.|.:.|..|....|:   .::.||...
 Worm   243 QNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIADKV---FISSGIHKA 304

  Fly   327 PILRLEVVDDIDTGKTET----------------FEVNRPFVFVI 355
            .|   ||.:|..|....:                |..:.||:|.:
 Worm   305 II---EVDEDGTTAAAASAFKVQLEMMIMAEPTQFVADHPFLFAV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp76ANP_524153.1 SERPIN 22..367 CDD:294093 77/368 (21%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 77/369 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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