DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-2 and SET5

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_012077.1 Gene:SET5 / 856614 SGDID:S000001250 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:436 Identity:97/436 - (22%)
Similarity:164/436 - (37%) Gaps:102/436 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KEHWKKGHRSECQCFEIATNEVLGRHLRATRDIKIGEQILKE-APLVLGPK------VASAPLCL 92
            |.|:.|...|:.:......::..||.|.|.||...|:.|||| .|:|..|.      :::...|.
Yeast   101 KIHFPKALDSDAKVEVKFIDDEHGRGLFAKRDFSKGQIILKENKPIVYIPPLDKLFLISNGKACA 165

  Fly    93 GCHRNL--LAPGKPRGNYHKCSSCSWPLCGKECED---SVH-------HKAECQLMSGSNFQSKI 145
            .|.:.|  |...|...:|..|..|....|.::|:.   |:|       ......::...|::..:
Yeast   166 RCGKALYDLTQHKIMVHYLDCEVCKAIWCSEKCKKAHASLHELLYHSWRSNRIDILHAGNWKRFV 230

  Fly   146 NYVPGEEERKESAYCVIMLLRCM----------------------HLKDKDPDAFLKLYNLED-- 186
            ||.  |:....:|:.|.::...|                      .:|.:|.......::|.:  
Yeast   231 NYC--EKYCFTAAFSVGLIYGSMLLDTTGEVKEQWQKLASISQRERIKLRDASGIGSTFSLLNGT 293

  Fly   187 --HLKERLETPLYQVLRANLITFIKTVLGMKDW---------------PEMDILRIAAILDTNTF 234
              |.:|..:....:.:..|:..  :||     |               .|:|..:...::  .||
Yeast   294 TVHTEEESDNGTKKGVEKNIDD--ETV-----WEKCYELFCGAFPKASEEIDFEKFLTMI--GTF 349

  Fly   235 EVRQPRERRKIRALYPGAAMISHDCVPNMR-HRFDDDMNIVFLAKRKIAKGEILSISYTQPLRST 298
            .:.|...:     :|...:.|:|||.||.. .:.::...:...|::.|.|||.:.|:|..||...
Yeast   350 NINQYNGQ-----VYHWISFINHDCEPNAYIEQVEEHEELRLHARKPIKKGEQIRITYVNPLHGV 409

  Fly   299 IQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKCKAG------KIISLNPLLNSAPWKCQL 357
            ..||..||....|.|.|.|||:  ||.:|.......|..|.      ||.|.:...:.:      
Yeast   410 RLRRRELRVNWGFLCQCDRCQN--ELSTFERVPNLEKKNADANLGVEKIDSNDSSEDGS------ 466

  Fly   358 CNFKRSAKDVVTSDAELQQELESLDKTTPVALEEFIYRHRADLHET 403
               |:|..:..:|..|.|.:|:.:.|..    :||    ..|:.||
Yeast   467 ---KKSTGNRKSSMREAQPDLKEILKNG----KEF----ELDIPET 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 4/10 (40%)
SET_SMYD <227..318 CDD:380997 26/91 (29%)
SET5NP_012077.1 SET 114..>147 CDD:394802 12/32 (38%)
SET_SMYD <352..429 CDD:380997 24/81 (30%)

Return to query results.
Submit another query.