DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SET5

DIOPT Version :9

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_012077.1 Gene:SET5 / 856614 SGDID:S000001250 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:436 Identity:97/436 - (22%)
Similarity:164/436 - (37%) Gaps:102/436 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KEHWKKGHRSECQCFEIATNEVLGRHLRATRDIKIGEQILKE-APLVLGPK------VASAPLCL 92
            |.|:.|...|:.:......::..||.|.|.||...|:.|||| .|:|..|.      :::...|.
Yeast   101 KIHFPKALDSDAKVEVKFIDDEHGRGLFAKRDFSKGQIILKENKPIVYIPPLDKLFLISNGKACA 165

  Fly    93 GCHRNL--LAPGKPRGNYHKCSSCSWPLCGKECED---SVH-------HKAECQLMSGSNFQSKI 145
            .|.:.|  |...|...:|..|..|....|.::|:.   |:|       ......::...|::..:
Yeast   166 RCGKALYDLTQHKIMVHYLDCEVCKAIWCSEKCKKAHASLHELLYHSWRSNRIDILHAGNWKRFV 230

  Fly   146 NYVPGEEERKESAYCVIMLLRCM----------------------HLKDKDPDAFLKLYNLED-- 186
            ||.  |:....:|:.|.::...|                      .:|.:|.......::|.:  
Yeast   231 NYC--EKYCFTAAFSVGLIYGSMLLDTTGEVKEQWQKLASISQRERIKLRDASGIGSTFSLLNGT 293

  Fly   187 --HLKERLETPLYQVLRANLITFIKTVLGMKDW---------------PEMDILRIAAILDTNTF 234
              |.:|..:....:.:..|:..  :||     |               .|:|..:...::  .||
Yeast   294 TVHTEEESDNGTKKGVEKNIDD--ETV-----WEKCYELFCGAFPKASEEIDFEKFLTMI--GTF 349

  Fly   235 EVRQPRERRKIRALYPGAAMISHDCVPNMR-HRFDDDMNIVFLAKRKIAKGEILSISYTQPLRST 298
            .:.|...:     :|...:.|:|||.||.. .:.::...:...|::.|.|||.:.|:|..||...
Yeast   350 NINQYNGQ-----VYHWISFINHDCEPNAYIEQVEEHEELRLHARKPIKKGEQIRITYVNPLHGV 409

  Fly   299 IQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKCKAG------KIISLNPLLNSAPWKCQL 357
            ..||..||....|.|.|.|||:  ||.:|.......|..|.      ||.|.:...:.:      
Yeast   410 RLRRRELRVNWGFLCQCDRCQN--ELSTFERVPNLEKKNADANLGVEKIDSNDSSEDGS------ 466

  Fly   358 CNFKRSAKDVVTSDAELQQELESLDKTTPVALEEFIYRHRADLHET 403
               |:|..:..:|..|.|.:|:.:.|..    :||    ..|:.||
Yeast   467 ---KKSTGNRKSSMREAQPDLKEILKNG----KEF----ELDIPET 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:280009 4/10 (40%)
SET <246..291 CDD:214614 13/45 (29%)
SET5NP_012077.1 SET 41..526 CDD:225491 97/436 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4564
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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