DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and ATXR2

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_188819.2 Gene:ATXR2 / 821736 AraportID:AT3G21820 Length:473 Species:Arabidopsis thaliana


Alignment Length:355 Identity:70/355 - (19%)
Similarity:117/355 - (32%) Gaps:127/355 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 CRNVVYCSREHQKEHWKKGHRSEC--QCFEIATNEVLG---RHLRATRDIKIGEQILKEAPLVLG 82
            |:...|||.......|:..|...|  :..|..:.|.||   :|...|.||           .:|.
plant   180 CQEAFYCSESCAAADWESSHSLLCTGERSESISREALGEFIKHANDTNDI-----------FLLA 233

  Fly    83 PKVASAPLCLGCHRNLLAPGKPRGNYHKCSSCSWPLCGKECEDSVHHKAECQLMSGSNFQSKINY 147
            .|..:..:.               .|.|..:           :.|..||:               
plant   234 AKAIAFTIL---------------RYRKLKA-----------EHVDKKAK--------------- 257

  Fly   148 VPGEEERKESAYCVIMLLR---------------CMHLKD----KDPDAF-LKLYNLEDHLKERL 192
               :.|.|:|     :||.               |:.|.|    .|..|| :::.||.....|.|
plant   258 ---QSEPKQS-----LLLEAWKPVSIGYKRRWWDCIALPDDVDPTDEGAFRMQIKNLACTSLELL 314

  Fly   193 ETPLYQVLRANL--ITFIKTVLGMKDWPEMDILRIAAILD-------------TNTFEVRQP--- 239
            :..::......|  :.....::||.:...:|::..:.:.|             ..|.|:.:|   
plant   315 KIAIFDKECEALFSLEIYGNIIGMFELNNLDLVVASPVEDYFLYIDDLPDAEKEETEEITRPFLD 379

  Fly   240 ------RERRKIRALYPGAAMISHDCVPN---MRHRFDDDMNIVFLAKRKIAKGEILSISYTQ-- 293
                  .:..:..|.:|..:.::|.|.||   .:...|.|...|.:|.|:|:|.|.::|||..  
plant   380 ALGDEYSDCCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQAVIIALRRISKNEEVTISYIDEE 444

  Fly   294 -PLRSTIQRRVHLRQAKC----FDCSCARC 318
             |.:.        |||..    |.|.|::|
plant   445 LPYKE--------RQALLADYGFSCKCSKC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 6/22 (27%)
SET_SMYD <227..318 CDD:380997 28/122 (23%)
ATXR2NP_188819.2 zf-MYND <173..203 CDD:460312 6/22 (27%)
SET_SMYD <380..466 CDD:380997 24/93 (26%)

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