DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and ASHR2

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_849991.1 Gene:ASHR2 / 816483 AraportID:AT2G19640 Length:398 Species:Arabidopsis thaliana


Alignment Length:291 Identity:76/291 - (26%)
Similarity:125/291 - (42%) Gaps:44/291 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRHLRATRDIKIGEQILKEAPLVL---GPKVAS--APLCLGCHRNLLAPGKPRGNYHKCSSCSW- 116
            ||.|.|.:.::.|:.||:|:||:|   .|.::|  :|.|..|.| |||...    :.||.|||. 
plant    22 GRSLVAAQSLRAGQVILRESPLLLYSAFPFLSSSVSPYCDHCFR-LLASSA----HQKCQSCSLV 81

  Fly   117 PLCGKECEDSVHHKAECQLMSGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKDKDPDAFLKL 181
            ..|...|..| |....|:.:...:..|...:.....:|:..|.   .||...:|....|..|..|
plant    82 SFCSPNCFAS-HTPWLCESLRRLHQSSSSAFSDQPSDRQVQAR---FLLSAYNLAAASPSDFQIL 142

  Fly   182 YNLE-------DHLKERLETPLYQVLRANLITFIKTVLGMKDWPEMDILRIAAILD---TNTFEV 236
            .:|:       |......::.....|. :|::.:...|.:...|::    .||:|.   .|.|.:
plant   143 LSLQGSGSSNGDPSCSAGDSAAAGFLH-SLLSSVCPSLPVSISPDL----TAALLSKDKVNAFGL 202

  Fly   237 RQP----RERRKIRA--LYPGAAMISHDCVPNMRHRF-------DDDMNIVFLAKRKIAKGEILS 288
            .:|    .|:|.:||  :||..:..:|||:|| ..||       |.:.:|:......:.:|..:.
plant   203 MEPCSVSNEKRSVRAYGIYPKTSFFNHDCLPN-ACRFDYVDSASDGNTDIIIRMIHDVPEGREVC 266

  Fly   289 ISYTQPLRSTIQRRVHLRQAKCFDCSCARCQ 319
            :||.....:...|:..|.:...|.|.|.||:
plant   267 LSYFPVNMNYSSRQKRLLEDYGFKCDCDRCK 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 28/106 (26%)
ASHR2NP_849991.1 SET_SMYD <198..296 CDD:380997 26/98 (27%)
Blue background indicates that the domain is not in the aligned region.

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