DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SDG37

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_849969.2 Gene:SDG37 / 816300 AraportID:AT2G17900 Length:485 Species:Arabidopsis thaliana


Alignment Length:494 Identity:115/494 - (23%)
Similarity:188/494 - (38%) Gaps:107/494 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QCFEIATNEVLGRHLRATRDIKIGEQILKEAPLVLGP-KVASAPLCLGCHRNLLAPGKPRGNYHK 110
            :|..::.....||.|...||.:.||.||.:.|.:..| ..:|...|.||.:.        .|..|
plant    16 RCLGVSNLPQKGRSLFTARDFRPGEVILSQKPYICVPNNTSSESRCDGCFKT--------NNLKK 72

  Fly   111 CSSCS--WPLCGKECEDSVH--HKAECQLMSGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLK 171
            ||:|.  | .||..|:.|..  |:.||:.::..           |:|:::.....|.|:..:::|
plant    73 CSACQVVW-YCGSSCQKSEWKLHRDECKALTRL-----------EKEKRKFVTPTIRLMVRLYIK 125

  Fly   172 DK----------DPDAFLKLYNLEDHLKERLETPLYQVLRANLITFIKTVLGMKDWPEMDILRIA 226
            ..          ..|.:..:..|..|:.|..|..:  :|.|.:...:..:|   .:|.:|:..||
plant   126 RNLQNEKVLPITTTDNYSLVEALVSHMSEIDEKQM--LLYAQMANLVNLIL---QFPSVDLREIA 185

  Fly   227 ---AILDTNTFEVRQPRERRKIRALYPGAAMISHDCVPNMRHRFDDDMNIVFLAKRKIAKGEILS 288
               :....|...:.....|.:...|:|..::|:|.|.||....|::.|.:| .|...|:|...::
plant   186 ENFSKFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAVLVFEEQMAVV-RAMDNISKDSEIT 249

  Fly   289 ISYTQPLRSTIQRRVHLRQAKCFDCSCARC------QDPEELGSFAGAQTCLKCKAGKIISLNPL 347
            |||.:...||:.|:..|::...|.|.||||      .|.||.....|.: |...|....:..:| 
plant   250 ISYIETAGSTLTRQKSLKEQYLFHCQCARCSNFGKPHDIEESAILEGYR-CANEKCTGFLLRDP- 312

  Fly   348 LNSAPWKCQLCNFKRSAKDV--VTSD--------------------AELQQELESL--------- 381
             ....:.||.|...||.::|  :.||                    .||.:.:|.|         
plant   313 -EEKGFVCQKCLLLRSKEEVKKLASDLKTVSEKAPTSPSAEDKQAAIELYKTIEKLQVKLYHSFS 376

  Fly   382 -------DKTTPVALEEFIYRHRADLHETNTHILQAKYALT------QLYGSAPGFAMEELSGES 433
                   :|...:.::..|:|...:.......:.|..|..|      |.|...   .:|.|.||:
plant   377 IPLMRTREKLLKMLMDVEIWREALNYCRLIVPVYQRVYPATHPLIGLQFYTQG---KLEWLLGET 438

  Fly   434 LNRKLQLCEELLKLADIF---DGGWSIFRGNLLIDMEEA 469
                .:....|:|..||.   .|..:.|...|...:|||
plant   439 ----KEAVSSLIKAFDILRISHGISTPFMKELSAKLEEA 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 26/90 (29%)
SDG37NP_849969.2 SET 24..281 CDD:394802 73/282 (26%)
zf-MYND 61..98 CDD:460312 14/45 (31%)
TPR_12 <396..453 CDD:315987 14/63 (22%)
Blue background indicates that the domain is not in the aligned region.

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