DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and smyd2b

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001025394.3 Gene:smyd2b / 568616 ZFINID:ZDB-GENE-041001-201 Length:434 Species:Danio rerio


Alignment Length:451 Identity:104/451 - (23%)
Similarity:173/451 - (38%) Gaps:111/451 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRHLRATRDIKIGEQILKEAP-----LVLGPKVASAPLCLGCHRNLLAPGKPRGNYH---KCSSC 114
            ||.||.:|...:|| :|...|     |.:|.:......|....:.|...||.:..::   .|...
Zfish    19 GRGLRVSRAYGVGE-LLFSCPAYSYVLSVGERGLICEQCFTRKKGLAKCGKCKKAFYCNANCQKK 82

  Fly   115 SWPLCGKECEDSVHHKAECQLMS--GSNFQSK---------INYVPGEEERKESAYCVIMLLRCM 168
            :||:          ||.|||.|.  |.|::..         |..:..::||..|.  :::||..|
Zfish    83 NWPM----------HKLECQAMCAFGENWRPSETVRLVARIIARLKAQKERSPSE--ILLLLGEM 135

  Fly   169 --HLKDKDPDAFLKLYNLEDHLKERLETPLYQVLRANLITFIKTVLGMKDWPE-MDILRIAAILD 230
              ||:|.|.:   |....|.|:     ..|:|....:|           |:|: ..:|.:.:.:.
Zfish   136 EAHLEDMDNE---KREMTEAHI-----AGLHQFYSKHL-----------DFPDHQALLTLFSQVH 181

  Fly   231 TNTFEVRQPRERRKIRALYPGAAMISHDCVPN--MRHRFDDDMNIVFLAKRKIAKGEILSISYTQ 293
            .|.|.|..........|::|..|:::|.|.||  :.:|   .:|....|.:.|:.|:.:..||..
Zfish   182 CNGFTVEDEELSNLGLAIFPDIALLNHSCSPNVIVTYR---GINAEVRAVKDISPGQEIYTSYID 243

  Fly   294 PLRSTIQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKCKAGKI--ISLNPLLNSAPWKCQ 356
            .|..|..|...||....|.|.|..|...    |....:..::.::.:|  ..:..::..|  :..
Zfish   244 LLYPTADRLERLRDMYYFSCDCKECTTK----SMDVVKMSVRKRSDEIGEKEIKDMVRYA--RNS 302

  Fly   357 LCNFKRSAKDVVTSDAELQQELE-SLDKTTPVALEEFIYRHRADLHETNTHILQAKY------AL 414
            :.||:|:.:|  .|..||.:..| |:||.:.|            ..::|.:||...|      ..
Zfish   303 MENFRRAKQD--KSPTELLEMCELSIDKMSTV------------FDDSNIYILHMMYQAMGICLF 353

  Fly   415 TQLYGSA---------------PGFAMEELS-----GE---SLNRKLQLCEELLKLADIFD 452
            |:.|..|               |.::|...|     |.   :|:|||...:...|...|.:
Zfish   354 TEDYEGAVRYGEKVIKPFTVLYPAYSMNVASMYLKLGRLYIALDRKLAGIDAFQKALTIME 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 25/92 (27%)
smyd2bNP_001025394.3 None
Blue background indicates that the domain is not in the aligned region.

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