DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC4578189

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_001238168.2 Gene:LOC4578189 / 4578189 VectorBaseID:AGAMI1_000965 Length:680 Species:Anopheles gambiae


Alignment Length:319 Identity:69/319 - (21%)
Similarity:120/319 - (37%) Gaps:83/319 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVASAPL-------CLGCHRNLLAPGKPRGNYHK 110
            ::|..||..:|...::..:.||:|.|      .|:|.|       |..|...:..       .:.
Mosquito   262 SSETEGRFAKAKAALRPNQLILREKP------HAAALLQEYSGTHCSDCFERIEV-------LYC 313

  Fly   111 CSSC-SWPLCGKECEDS---VHHKAECQLM-----SGSNFQSKINYVPGEEERKESAYCVIMLLR 166
            |..| ....|.:.||.:   .:|:.||..:     ||:...|.:            |..:|....
Mosquito   314 CPHCVDVVFCSERCERNGCESYHRYECGFLGTLWASGATIVSLL------------ALRIITQKP 366

  Fly   167 CMH--------------LKDKDP-DAFLKLYNLEDHLKERLETPLYQVLRANLITFIKTVLGMKD 216
            |.:              :.||.| |.:.|::||..|..:|  ||...::...:.|.:.|||.|.:
Mosquito   367 CAYFEEIRHELPELSASMTDKLPDDDYRKIFNLVTHSDKR--TPEDNLVWTLMATMLNTVLRMAN 429

  Fly   217 WPEMD---------ILRIAAILDTNTFEVRQPRERRKIR---------ALYPGAAMISHDCVPNM 263
            :....         :|....:::.|..:|.:.:.:....         ||||..|:.:|.|.|.:
Mosquito   430 YSAAGEENNFLGYLLLHNLQVVNYNAHDVSEVQRKHANEPALSVAVGAALYPLLALFNHSCDPGI 494

  Fly   264 RHRFDDDMNIVFLAKRKIAKGEILSIS----YTQPLRSTIQRRVHLRQAKCFDCSCARC 318
             .|:.....:.....:.||.|.:::.:    ||:..||  :||..|.....|:|.|..|
Mosquito   495 -VRYFTGTTVHVRTIKNIAAGALIAENYGPLYTRMARS--ERRQSLATNYKFECGCEAC 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 24/103 (23%)
LOC4578189XP_001238168.2 None
Blue background indicates that the domain is not in the aligned region.

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