DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC4578080

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_061515696.1 Gene:LOC4578080 / 4578080 VectorBaseID:AGAMI1_012181 Length:378 Species:Anopheles gambiae


Alignment Length:222 Identity:52/222 - (23%)
Similarity:77/222 - (34%) Gaps:64/222 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EHQKEHWKKGHRSE------CQCFEIATNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVASAPL 90
            |..||..:..|...      ..|.::..||..||::..||.:|:|:.::.:.|.|   |......
Mosquito   198 EDPKEELRLSHPGHEHMPHVANCLQLQQNEQYGRYVVTTRRLKVGDVVMLDTPFV---KTLQENC 259

  Fly    91 ----CLGCHRN---LLAPGKPRGNYHKCSSCSWPL-CGKECEDSV---HHKAECQLMSGSNFQSK 144
                |..||..   .|.|         |..|:|.: |.:||....   :|:.||.:|..:  .|.
Mosquito   260 RYVRCDFCHAERPFTLIP---------CEGCTWVMYCSQECLSKAFDQYHRYECGVMRDA--YSI 313

  Fly   145 INYVPGEEERKESAYCVIMLLRCMHLKDKDPDAFLKLYNLEDHLKERLETPLYQVLRANLITFIK 209
            ....|....|..:....|.          |.|    |..|::||....|:      |.|..|.  
Mosquito   314 CGRFPATALRATATAISIF----------DGD----LVALQNHLDALDES------RVNGFTM-- 356

  Fly   210 TVLGMKDW----PEMDILRIAAILDTN 232
                  ||    |: |:.....:|.||
Mosquito   357 ------DWRMATPK-DVYSTMHVLTTN 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 4/19 (21%)
SET_SMYD <227..318 CDD:380997 3/6 (50%)
LOC4578080XP_061515696.1 None

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