DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SmydA-7

DIOPT Version :9

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster


Alignment Length:530 Identity:130/530 - (24%)
Similarity:219/530 - (41%) Gaps:115/530 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ATNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVASAPL-CLGCHRNLLAPGKPRGNYHKCSSCS 115
            |.:|.|||||.|:..|:.|:.||:|.||::.|......| |..|.:.         :|..|..|.
  Fly    11 AHDEKLGRHLVASIAIEPGDTILEERPLLVAPHWECHQLKCAQCLQE---------SYVICRRCQ 66

  Fly   116 -WPLCGKECEDSVHHKAECQLM-SGSNFQSKINYVPGEEERKESAYC---------------VIM 163
             :||| .:|..  |.:.||:.. ||:.                .|.|               :::
  Fly    67 VFPLC-MDCNQ--HDEFECEFFTSGAG----------------KALCKDILVKNFGICGLLKLLL 112

  Fly   164 LLR-------CMHLKDKDPDAFLKLYNLEDH--------------LKERLETPLYQVLRANLITF 207
            ||.       |..|.|..       .||.|:              ::..:|:.|..||....:| 
  Fly   113 LLENPRTKGDCQMLIDVP-------INLSDYRDGEGMWQEHEELVVRPLMESGLADVLPTQELT- 169

  Fly   208 IKTVLGMKDWPEMDILRIAAI-LDTNTFEVRQPRERRKIRALYPGAAMISHDCVPNMRHRFDDDM 271
                        .|.|....| :|:|:||| ..::...::.::...|.:.|.||||.....|:..
  Fly   170 ------------SDALHAHCIRIDSNSFEV-TAKDGDTLKGIFVWGATLPHHCVPNTVVALDEQF 221

  Fly   272 NIVFLAKRKIAKGEILSISYTQPLRSTIQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKC 336
            |:...|...:..|:|:..|||.||..|.||:..||.::..:|.|:||.||.|:|:...:..|.:|
  Fly   222 NMKLYAAVPLQPGDIIYNSYTNPLMGTSQRQHQLRLSRRLECICSRCLDPTEMGTHMSSLKCKEC 286

  Fly   337 KAGKIISLNPLLNSAPWKCQLCNFKRSAKDVVTSDAELQQELES--LDKTTPVAL-EEFIYRHRA 398
            ....:..::.......|:|..|....:|.:|    .|||..:.|  :|....:.: |..:.::..
  Fly   287 PGFSVCEIDSNGKLGDWRCPDCRALLTAAEV----HELQAAVGSALVDAMGDLQVYEALLTQYGP 347

  Fly   399 DLHETNTHILQAKYALTQLYGSAPGF-AMEELSGESLNRKLQLCEELLKLADIFDGG----WSIF 458
            .||..:..:|..|..:..:..:|... :|::...:.|.|:::||.:||.:......|    ::|.
  Fly   348 LLHPNHFMLLDIKQNIASILRAAALMNSMDQPCKKLLARRVELCSDLLPVCRAVVPGISKLYAIG 412

  Fly   459 RGNLLIDMEEALVTQALRSKDPLDCEEK-----LRNAAEMLREIRNIMKHEPE--MQQLLLERQV 516
            ....|:.:.|.:..|...|    |..:|     ||.|:.:..|..::::.|||  .:..|.:|  
  Fly   413 LFEYLLALVELVELQFAES----DLSKKEYVAHLRTASLVATEAMDLLRFEPENSAEGYLADR-- 471

  Fly   517 ILSSALERFE 526
             :|..|||.|
  Fly   472 -ISMELERIE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:280009
SET <246..291 CDD:214614 11/44 (25%)
SmydA-7NP_001261039.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46455
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2203
54.920

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