DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC3291277

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_564258.2 Gene:LOC3291277 / 3291277 VectorBaseID:AGAMI1_001411 Length:1309 Species:Anopheles gambiae


Alignment Length:494 Identity:111/494 - (22%)
Similarity:180/494 - (36%) Gaps:170/494 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QCFEIATNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVASAPL---------CLGCHRN---LL 99
            :|.|:..|...||||..|:.:|.|:.::.|.|.        |.|         |..||..   .|
Mosquito   868 KCVELRQNSEFGRHLVTTQHLKAGDVLMIEKPY--------ASLLCERDQYKRCAFCHNEDTFTL 924

  Fly   100 APGKPRGNYHKCSSCSWPL-CGKECEDSVH---HKAEC--------------QLMSG-------- 138
            .|         |..|:..: |.:||.|..|   |:.||              :::.|        
Mosquito   925 IP---------CEGCTMAMYCSEECRDKAHKQYHRYECAVLRDCWRSVGFPVEMLLGLRTVATAF 980

  Fly   139 SNFQSKINYVPGE--------EERKESAYCVIMLLRCMHLKDKDPDAFLKLY------NLEDH-- 187
            ::|...:    |:        :|.|.:|:.|..      .|..|.|.:..::      |..||  
Mosquito   981 ASFDQSL----GQWIYRMETLDETKVNAFTVDW------NKATDRDIYDTVHVLATNQNRRDHKQ 1035

  Fly   188 --------------LKERLE-TPL-------YQVLRANLITFIKTVLGMK-DWPEMDILRI---- 225
                          |.:|.| .||       .::|...|:...:|.|..| |...|:.:::    
Mosquito  1036 LASLIFFAYIVQGLLLDRTELRPLCWSCPSRRKLLFELLLRHTQTALTNKNDVYHMERVKLEDDH 1100

  Fly   226 ---------AAILDTNTFEVRQPR-----ERRKIRALYPGAAMISHDCVPNMR--HRFDDDMNIV 274
                     :::.:.|:.:.:.||     ||....|:||..:|::|.|:||:.  |..|.  .:.
Mosquito  1101 VEDDESEEDSSVDNNNSDDRKSPRNVHHEERTHAIAIYPLFSMVNHSCIPNVAPIHLLDG--RLA 1163

  Fly   275 FLAKRKIAKGE----ILSISYTQPLRSTIQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLK 335
            .:|.|.||.||    |...|...|..|.  ||..|:.:..|.|.||.||                
Mosquito  1164 MVATRPIAAGEQLYNINGFSTFDPDDSA--RRHALQLSHFFKCRCASCQ---------------- 1210

  Fly   336 CKAGKIISLNPLLNSAPWKCQLCNFKRSAKDVVTSDAELQQELESLDKTTPVALEEFIYRHRADL 400
               .:.:..:|:        :|...:...:.:...|.:.|||:..|       :|......|..|
Mosquito  1211 ---SRAVGFSPV--------KLLEEQYFFRRLSLKDWDWQQEVHML-------VEYINQAERRHL 1257

  Fly   401 HE--TNTHILQAKYALTQLYGSAPGFAMEELSGESLNRK 437
            ..  |...:|.| :.:.:|:|.||...|..|:|| |::|
Mosquito  1258 QSVVTGPELLLA-HTMRKLHGYAPDDDMFTLTGE-LSKK 1294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 32/101 (32%)
LOC3291277XP_564258.2 None
Blue background indicates that the domain is not in the aligned region.

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