DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC3289638

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_566179.1 Gene:LOC3289638 / 3289638 VectorBaseID:AGAMI1_014221 Length:526 Species:Anopheles gambiae


Alignment Length:345 Identity:69/345 - (20%)
Similarity:123/345 - (35%) Gaps:104/345 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 CFEIATNEVLGRHLRATRDIKIGEQILKEAPL--VLGPKVASAPLCLGCHRN---LLAPGKPRGN 107
            |.|:..:...||:|:..:.:|:|:.::.:.|.  ||.|:...| .|..|.|.   .|.|      
Mosquito   148 CLEMRRSPQYGRYLQTNKALKVGDVVMIDEPYVSVLEPEFCYA-RCDHCQRPAPFTLIP------ 205

  Fly   108 YHKCSSCSWPL-CGKEC---EDSVHHKAECQLM-------------------------------- 136
               |..|:..: |.|.|   ..:.:|:.||.|:                                
Mosquito   206 ---CERCTKAMYCSKNCLRRARTEYHEFECALVHHLTETTRDPVVLLAWRAVTRAISTYRYNLRH 267

  Fly   137 --SGSNFQSK-------INYVPGEEERKESAYCVIMLLRCMHLKDKDP-DAFLKLYNLEDH---L 188
              ...|:.|:       :|:|.|:    :.|:..:.:|..:.....|| :|.:...:.|.|   :
Mosquito   268 LKQRRNYLSRTEVNPLMLNWVDGQ----KIAFSAVYILASLARAPNDPVEARVAQISREMHCHLV 328

  Fly   189 KERLETP---------------LYQVLRANLITFIKTVLGMKDWPEMDILRIAAILDTNTFEVRQ 238
            .|..:|.               .|:.|:..........|..:|.||.....:       .|.:| 
Mosquito   329 SENGQTANDDSGSVPYPWVGEMCYRFLKVMQCNARPAQLTRRDEPEGQYRAV-------PFALR- 385

  Fly   239 PRERRKIRALYPGAAMISHDCVPNMRHRFD-DDMNIVFLAKRKIAKGEILSISYTQPLRST--IQ 300
                     .:|..::::|.|.||:: .|| .|.....:..:.||.|..|..:|......|  .:
Mosquito   386 ---------CHPLISLLNHSCAPNVK-CFDLRDGRCSAVVIQPIAAGGQLFANYGYDYLQTGRDE 440

  Fly   301 RRVHLRQAKCFDCSCARCQD 320
            ||..|::...|.|:|..|::
Mosquito   441 RREGLQRVFGFTCNCDACEN 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 22/93 (24%)
LOC3289638XP_566179.1 SET 143..458 CDD:394802 68/341 (20%)
Blue background indicates that the domain is not in the aligned region.

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