DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and Smyd4-3

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_319583.5 Gene:Smyd4-3 / 1279815 VectorBaseID:AGAMI1_007054 Length:650 Species:Anopheles gambiae


Alignment Length:466 Identity:103/466 - (22%)
Similarity:158/466 - (33%) Gaps:133/466 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FEIATNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVA----SAPLCLGCHRNLLAPGKPRGNYH 109
            |:.:.:|  ||..|...|:|....:|.|.|.|   .|.    |...|..|.:.:..|       .
Mosquito   233 FDESPDE--GRFARTNTDLKPNTILLLERPHV---SVLLEDYSLDHCTHCFKRVSVP-------I 285

  Fly   110 KCSSCS-WPLCGKECE---DSVHHKAEC---QLMSGSNFQSKINYVPGEEERKESAYCVIMLLRC 167
            .|..|: ...|..|||   ::.:|:.||   .::.||......:.......:|...|.:.:....
Mosquito   286 ACPLCADVVFCSDECETKANATYHRYECGFLPILWGSGASITCHMALRMITQKSEEYFLKLKPEL 350

  Fly   168 MHLK----DKDP-DAFLKLYNLEDHLKERLETPLYQ-VLRANLITFIKTVLGMKDWPEMD----- 221
            ..|.    ||.| |.:.|:|.|..|...|.....:| .|.|.|:....|:.|....|:..     
Mosquito   351 AGLTNEQIDKLPVDDYRKVYKLVTHESTRSPEDFFQRTLMATLLNACLTLGGYGACPQEQNFIGG 415

  Fly   222 -ILRIAAILDTNTFEVRQPRERRKIR--------------ALYPGAAMISHDCVPNMRHRFDDDM 271
             ::....:|..|..||.:     .||              .|||..|:.:|.|.|.:...:..:.
Mosquito   416 LLVHNLQLLQFNAHEVSE-----MIRETAEDIGKSTFIGGGLYPTLALFNHSCDPGVTRYYRGNQ 475

  Fly   272 NIVFLAKRKIAKGEILSISY----TQPLRSTIQRRVHLRQAKCFDCSCARC---------QDPEE 323
            ..|...| .|....:::.:|    ||..|.  :||..|.....|.|.|..|         .||..
Mosquito   476 VCVRTVK-NIPADSMVAENYGPLFTQVRRD--ERRDTLLHQYRFTCQCVPCVENWPLFTEMDPGV 537

  Fly   324 LGSFAGAQTCLKCKAGKIISLNPLL-----NSAPWKCQLC----NFKRSAKDVVTSDAELQQELE 379
            :.        .:|.:|||.| |.||     |....||..|    |..:..|.:        |:.:
Mosquito   538 IR--------FRCDSGKICS-NVLLIPAAVNDFMVKCTECGEHTNIMKGLKSL--------QDTD 585

  Fly   380 SLDKTT---------PVALEEFIYRHRADLHETNTHILQAKYALTQLYGSAPGFAMEELSGESLN 435
            .|.||.         ..||.:::     ::.||.:.:|...|                       
Mosquito   586 MLFKTATRLHSAGEYEAALRKYV-----EMMETMSEVLVPPY----------------------- 622

  Fly   436 RKLQLCEELLK 446
            |...||::.|:
Mosquito   623 RDYHLCQQGLR 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 26/108 (24%)
Smyd4-3XP_319583.5 None
Blue background indicates that the domain is not in the aligned region.

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