DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SmydA-3

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_061512667.1 Gene:SmydA-3 / 1278184 VectorBaseID:AGAMI1_000512 Length:500 Species:Anopheles gambiae


Alignment Length:504 Identity:161/504 - (31%)
Similarity:245/504 - (48%) Gaps:64/504 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LGRHLRATRDIKIGEQILKEAPLVLGPKVASAPLCLGCHRNLLAP-----GKPRGNYHKCSSCSW 116
            |||:..|.||:|.||.:.:|.|..:|||:.|.||||.|    ..|     |.||     ||.|.|
Mosquito    14 LGRYGVAARDLKAGELLFEETPFAVGPKLDSPPLCLEC----CCPVDGGEGGPR-----CSRCGW 69

  Fly   117 PLCGKECE----DSVHHKAECQLMSGSNFQSKINYVPGEEERKESAYCV----IMLLRCMHLKDK 173
            ||| ::|.    :.|:|:.||::.:.:.    :.:.|.|:   .:|.||    |..||.:..|:.
Mosquito    70 PLC-EDCSAGGAELVYHRGECEVFAANG----VRFRPVED---STAGCVQLDCITPLRVLLAKEA 126

  Fly   174 DPDAFLK-LYNLEDHLKERLETPLYQVLRANLITFIKTVLGM-KDWPEMDILRIAAILDTNTFEV 236
            |...:.: :..:|.|..||.|...::|...|::.|::...|: |.:....:.|...:||.|.||.
Mosquito   127 DEARWKREIEPMEYHDAERREGANWKVDENNIVAFLRGPCGLGKRFSAELVQRAIGLLDVNAFEG 191

  Fly   237 RQPRERRKIRALYPGAAMISHDCVPNMRHRF--DDDMNIVFLAKRKIAKGEILSISYTQPLRSTI 299
            | .......|.|||..|:::|:||||:.|..  .:...:|......:.:|:.|..:||..|..|:
Mosquito   192 R-TGSGYSCRGLYPQLAIMAHNCVPNVVHSIHPSNGFRMVARVAVDVREGDKLYTTYTYTLTGTV 255

  Fly   300 QRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKCKAGKIISLNPLLNSAPWKCQLCNFKRSA 364
            .|:..|:.:|.|.|.|.||.||.|||:......|.||..|.|.|.:||..:|.|||..|.||.|.
Mosquito   256 ARQSILKASKFFTCRCTRCLDPTELGTHFSTLLCSKCSGGLITSTDPLDENAEWKCGQCGFKTSG 320

  Fly   365 KDVVTSDAELQQELESL-----DKTTPVALEEFIYRHRA---DLHETNTHILQAKYALTQLYGSA 421
            ..|..:...:..|::.|     :.....|.|....::|:   .||..||.|   :::|.:|||..
Mosquito   321 AAVQKAVMTIHNEIDELACFEYEAGRLEAYETVYKKYRSVLHPLHFINTSI---RHSLIELYGRI 382

  Fly   422 PGFAMEELSGESLNRKLQLCEELLKLADIFDGGWSIFRGNLLIDMEEALVTQA----LRSKDPLD 482
            ||:.|.||....|.||::||..:|::.|:|:.|.|..|..:|.::...|:..|    .|.:|..|
Mosquito   383 PGYEMAELPDVLLERKVELCRSILRVLDVFEPGKSRARAMILYELHAPLIMLAQSAFARGEDQRD 447

  Fly   483 ---CEEKLRNAAEMLREIRNIMKHE----PE-------MQQLLLERQVI 517
               .:::|..||::|.|...|:..|    ||       .|.|...||.|
Mosquito   448 GKSLKQQLNEAAQILEECGAILDWEDPATPEGILANVAQQSLAQLRQSI 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 30/92 (33%)
SmydA-3XP_061512667.1 None
Blue background indicates that the domain is not in the aligned region.

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