DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and Smyd5

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_313299.2 Gene:Smyd5 / 1274211 VectorBaseID:AGAMI1_006974 Length:391 Species:Anopheles gambiae


Alignment Length:385 Identity:86/385 - (22%)
Similarity:125/385 - (32%) Gaps:142/385 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRHLRATRDIKIGEQILKEAPLV------------------LGP---------KVASAPLCLGCH 95
            ||.|.|...|..|..|.:|.|||                  |.|         ::|:.| |:...
Mosquito    13 GRGLYAAELIPEGGTIFEEQPLVSCQYSWNAAYGYLACEYCLRPLETAERNAQRLANDP-CIMLP 76

  Fly    96 RNLLAPGKPR-GNYHKCSSCSWPLCGKECEDSV---HHKAECQLMSGSN----------FQSKIN 146
            |....|.:.. .|:.||..|....|..:|....   :|.|.|......|          |..|::
Mosquito    77 RTECCPVEANLANHTKCERCGALYCSADCLQEAANRYHTAVCLGSEAHNEQHPVNALLEFWKKMH 141

  Fly   147 YVPGEEERKESAYCVIML---LRCMHLKDKDPDAFLKLYNLEDHLKERLETPLYQVLRANLITFI 208
            |.|        ..|.|||   :..|..:..||.|          |:..|:..:::.:..:|:.|.
Mosquito   142 YPP--------ETCGIMLFVKIVGMFRQAADPQA----------LQAELQDFVHKSVNEDLLIFH 188

  Fly   209 KTVLGMK------------------------DW--PEMDILRIAAILDTN--------------- 232
            | :||.|                        .|  || ....:.|::.||               
Mosquito   189 K-MLGEKFTQQIEQLYELFCKTFQVESDERLSWLTPE-GFKSLVALVGTNGQGIGTSSFGDWVKN 251

  Fly   233 -TFEVRQPRERRKI-----------------------RALYPGAAMISHDCVPNMRHRFDDDMNI 273
             |......:||:.:                       .||:...:.|:|.|.||....|....::
Mosquito   252 VTACEMSDQERQAVDQLIDDLYAKMDDVVGSFLNNEGSALFARQSKINHSCAPNAETVFPKSNHM 316

  Fly   274 VFL-AKRKIAKGEILSISYTQPLRSTIQRRVHLRQAK-----CFDCSCARCQ----DPEE 323
            :.| |.|.|..||.:.|||..  ...:||..|.||..     .|.|.|.:|:    ||:|
Mosquito   317 LALRATRDIQPGEEICISYLD--ECNLQRSRHSRQKTLKDYYLFICQCEKCESQINDPDE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 31/135 (23%)
Smyd5XP_313299.2 None
Blue background indicates that the domain is not in the aligned region.

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