DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and Smyd4-2

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_061519376.1 Gene:Smyd4-2 / 1272955 VectorBaseID:AGAMI1_014187 Length:669 Species:Anopheles gambiae


Alignment Length:398 Identity:97/398 - (24%)
Similarity:142/398 - (35%) Gaps:118/398 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRHLRATRDIKIGEQILKEAPLVLGPKVAS-------APLCLGCHRNLLAPGKPRGNYHKC-SSC 114
            ||::.|..|:..||.||.|      |..|:       ...|..|...|:||       ..| ..|
Mosquito   268 GRYVVAAADLGPGEVILTE------PAYAACLHAKYYGTHCSACFSRLIAP-------VACPDCC 319

  Fly   115 SWPLCGKECED---SVHHKAECQ---LMSGSNFQSKINYV----------PGE--EERKESAYCV 161
            ....|...|.|   :.:|:.|||   ||.||. .|.:.:|          |.:  ||.|      
Mosquito   320 GVAFCSVACRDKACATYHRFECQYLDLMIGSG-MSILCHVALRMVTQAGTPEKVLEEGK------ 377

  Fly   162 IMLLR---CMHLKDKDPDAFLKLYNLEDHLKERLETPLYQVLRANLITFIKTVLGMKDW------ 217
              :||   |.|.:.:||         |||.|..|.|           .|:...|...::      
Mosquito   378 --MLRDTFCAHTEHRDP---------EDHFKRTLMT-----------AFLLRCLQKAEFFGRRTT 420

  Fly   218 ----PEMDILRIAAI-------LDTNTFEVRQPR---ERR----KIR----ALYPGAAMISHDCV 260
                |....|.:.|:       |..|..||.:.|   |.|    |::    .:|.||:|.:|:|.
Mosquito   421 EAPEPTEQELEVGAVLLSALQSLQFNAHEVYETRITGEHRFDTAKVQYIGVGIYRGASMFNHECY 485

  Fly   261 PNMRHRFDDDMNIVFLAKRKIAKGEILSISY-----TQPLRSTIQRRVHLRQAKCFDCSCARCQD 320
            |.:...|.....|:. ..|.|..|.::..:|     .||  ..|::| :||....|.|.|..|.:
Mosquito   486 PGVTRTFLGTAMILH-TSRPIPAGAVVPENYGPHFMRQP--KAIRQR-NLRSRYWFKCDCRACAE 546

  Fly   321 PEELGSFAGAQTCLKCK---AGKIISLNPLLNSAPWKCQLCNFKRSAKDVVTSDAELQQELESLD 382
            .........|:..|:|.   .|..::.....:....||..|      |..:..||.::. ||:.|
Mosquito   547 DWPQMDKLPAKPRLRCPTEGCGNALAYPSKPSQRNAKCNKC------KQQINLDANVKM-LEASD 604

  Fly   383 KTTPVALE 390
            :......|
Mosquito   605 QLCTTGAE 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 31/113 (27%)
Smyd4-2XP_061519376.1 None
Blue background indicates that the domain is not in the aligned region.

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