DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC1272665

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_559081.4 Gene:LOC1272665 / 1272665 VectorBaseID:AGAMI1_004335 Length:511 Species:Anopheles gambiae


Alignment Length:492 Identity:148/492 - (30%)
Similarity:232/492 - (47%) Gaps:70/492 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EIATNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVASAPLCLGCHRNLLAPGKPRGNYHKCSSC 114
            ||..::.|||.|.|.||||.||.||.|.|:|:||...:...||||    |.|..     ..|..|
Mosquito    10 EIRKSDQLGRFLVANRDIKPGELILAEDPIVVGPYWDADISCLGC----LGPAS-----RTCRVC 65

  Fly   115 -SWPLCGKECEDSVHHKAECQLMSGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKDKDPDAF 178
             ..||| ::|  |.|...||.....:   ||:|     :......:.:|..|||:.|...|.|.:
Mosquito    66 LKGPLC-RDC--SRHDPVECSFYEQA---SKLN-----KNFLFDHFNIITPLRCLLLYRSDRDKY 119

  Fly   179 LKLYNLEDHLKERLETPLYQVLRANLITFIKTVLGMKDWPEMDIL--------RIAAILDTNTFE 235
            .::..:|.|.:.|.:|.::.:....:   ::.:|..||:.::|.|        ||..|||.||||
Mosquito   120 NEMMAMESHFESRRDTEIWHIHNQYV---VEPMLNEKDFQQIDDLTVTGELLQRICGILDVNTFE 181

  Fly   236 VRQPRERRKI------RALYPGAAMISHDCVPNMRHRFDDDMNIVFLAKRKIAKGEILSISYTQP 294
            :|...:.:.:      |.|||..::::|:|..|.....|....:...:...|..||:|..:||:.
Mosquito   182 IRGNMDSQGVQMNNLARGLYPKTSLMTHNCQTNTLIAVDGMSKLRLYSSIGIKAGELLYYNYTRV 246

  Fly   295 LRSTIQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKCKAGKIISLNPLLNSAPWKCQLCN 359
            |.||.:|:.|||:.|.|.|:||||.||.|||:...:..|..|..|..:...   .:..|:|..|.
Mosquito   247 LFSTFERQTHLRKGKYFICNCARCSDPTELGTHLSSLKCTACDDGLCVFHT---ETPKWECLTCG 308

  Fly   360 FKRSAKDVVTSDAELQQELES--LDKTTPVALEEFIYRHRADLHETNTHILQAKYALT-QLYGSA 421
            .:...:.|.....|.:.::.|  ||...   ||:.|.:|...|:..::.:|:||.:|. :|....
Mosquito   309 HQLPREYVNQIMCEARDDISSCALDSRN---LEKVIGKHSKTLNPHHSLVLEAKQSLAGELRNMC 370

  Fly   422 PGFAMEELSGESLNRKLQLCEELLKLADIFDGGWSIFRGNLLIDMEEALVTQALRSKDPLDCEEK 486
            ..:.:..:..::|.|||:||||:|::..:.|.|.|...|..|.:...|||..:.|:.|       
Mosquito   371 MSYDIHNVPRQALKRKLELCEEMLQILRVLDPGVSRLTGIALYEYHAALVDLSRRNHD------- 428

  Fly   487 LRNAAEMLREIRNIMKHEPEMQQLLLERQVILSSALE 523
                   :.||:.     ||    ||||..:..:||:
Mosquito   429 -------IGEIKT-----PE----LLERLKLSEAALK 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 34/96 (35%)
LOC1272665XP_559081.4 None
Blue background indicates that the domain is not in the aligned region.

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