DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SmydA-5

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_311564.5 Gene:SmydA-5 / 1272663 VectorBaseID:AGAMI1_015164 Length:557 Species:Anopheles gambiae


Alignment Length:567 Identity:166/567 - (29%)
Similarity:273/567 - (48%) Gaps:73/567 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SCALCQAKASQLCAACRNVVYCSREHQKEHWKKGHRSEC-QCFEIATNEVLGRHLRATRDIKIGE 71
            :|..|...|...||.|:.|.||:.:|||:|||..|:.|| :.:|:..::.:|||..||:.|:...
Mosquito     4 NCGYCGVPAKLKCAGCQQVYYCNPDHQKKHWKAKHKHECVKPYELTKSDEIGRHFVATKTIEKDT 68

  Fly    72 QILKEAPLVLGPKVASAPL--------CLGCHRNLLAPGKPRGNYHKCSSCSWPLCGKECE---D 125
            .:..|.|||:|||...|..        |:||..:.     |.|.:: |..|.||.|..:|.   :
Mosquito    69 ILFSENPLVIGPKWNLADYEQRSTVVPCVGCFTDC-----PLGQFY-CEFCRWPACKPDCPGLGN 127

  Fly   126 SVHHKAECQLM-------SGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKDKDPDAFLKLYN 183
            |..|..||.::       .|.:.:...:|.         .|..:::|:|:.|:.::.|.|.:|.|
Mosquito   128 SNLHGLECGVLRFGRPPKPGDDPEMFFDYY---------RYDALLVLKCLALQIRNADLFDQLIN 183

  Fly   184 LEDHLKERLETPLYQVLRANLITFI----------------KTVLGMKDWPEMDILRIAAILDTN 232
            ||.|...|..:..|......:::::                |.||.|.|...:.:  |..||:.|
Mosquito   184 LESHYNARKNSRYYADTDERVVSYLFRNFLDPLQKLERKEGKVVLKMCDRKTLHM--IGGILEVN 246

  Fly   233 TFEVRQPRER-RKIRALYPGAAMISHDCVPNMRHRFD--DDMNIVFLAKRKIAKGEILSISYTQP 294
            ...:  |... |:|..|||...::.|:|:||..:.||  ..|.:.|.|.|.|.|||.::.:||..
Mosquito   247 AMII--PLSNGREICGLYPMGCLLEHNCMPNSFYTFDCSKGMKLTFKAGRDIQKGEHITTTYTHS 309

  Fly   295 LRSTIQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKCK----AGKIISLNPLLNSAPWKC 355
            |..|..||.||:..|.|.|.|:||.||.|.|:|..|..|:..:    .|..:.:|||...:.|||
Mosquito   310 LWGTQLRREHLKTNKYFACKCSRCSDPTEFGTFLSALRCMGIENEPCGGFQLPINPLAEDSDWKC 374

  Fly   356 QLCNFKRSAKDVVTSDAELQQELESL--DKTTPVALEEFIYRHRADLHETNTHILQAKYALTQLY 418
            ..|..:.:...|....:::.:|::.:  .|::....|..|::.:..||..:.|:...|::|.|:|
Mosquito   375 NRCPVQITHDQVNFLMSKIGEEVDDVMSRKSSVKEFENLIHKLQNFLHPNHFHLQTLKHSLIQMY 439

  Fly   419 GSAPGFAMEELSGESLNRKLQLCEELLKLADIFDG---GWSIFRGNLLIDMEEALVTQALR--SK 478
            |..||..:.|||.|.|..||::|.|:|.:.::.|.   ..|::...:|::...||:....|  |.
Mosquito   440 GRFPGHRLSELSDEILRTKLKMCHEMLTIIEVLDPESFRLSLYASVILLEQHAALIELHKRQNSL 504

  Fly   479 DPLDCEEKLRNAAEMLREIRNIMKHEPEMQQ--LLLERQVILSSALE 523
            ...:.::.|..|.:.|...:||:::|....|  .|:|:   :.||||
Mosquito   505 TASNVKDALSEALQSLVRAKNILRNEMGTLQGKKLMEQ---IESALE 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 16/36 (44%)
SET_SMYD <227..318 CDD:380997 35/93 (38%)
SmydA-5XP_311564.5 None

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