DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SmydA-1

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_309979.5 Gene:SmydA-1 / 1271226 VectorBaseID:AGAMI1_002584 Length:534 Species:Anopheles gambiae


Alignment Length:524 Identity:163/524 - (31%)
Similarity:259/524 - (49%) Gaps:38/524 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CALCQAKASQLCAACRNVVYCSREHQKEHWKKGHRSECQCFEIATNEVLGRHLRATRDIKIGEQI 73
            |.:|:.:||:.|:.|..|.||..|||::.||. |::.||.|:|.:||..||.|.||||||.||.:
Mosquito    14 CPVCKKEASKRCSRCAMVYYCCVEHQQQDWKV-HKTTCQPFKIFSNEQYGRFLVATRDIKAGEIV 77

  Fly    74 LKEAPLVLGPKVASAPLCLGCHRNLLAPGKPRGNYHKCSSCSWPLCGKECEDSVHHKAECQ--LM 136
            |||:|||.||...:.|:|:||     ..|.....|..|..|.||:|.:.|:||..|:|||:  :.
Mosquito    78 LKESPLVHGPAQITGPVCVGC-----LQGLEEKKYLDCERCGWPVCKRSCQDSPSHQAECKFTIA 137

  Fly   137 SGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKDKDPDAFLKLYNLEDHLKERLETPLYQVLR 201
            .||....:..|||      ...|..:|.:||:.|.:.||..:..|..||.|.:||..:..::..|
Mosquito   138 RGSKISIQHFYVP------HPTYQCLMPVRCLLLAESDPARWETLLKLESHEEERRGSEQWRNDR 196

  Fly   202 ANLITFIKTVLGMKD-WPEMDILRIAAILDTNTFEVRQPRERRKIRALYPGAAMISHDCVPNMRH 265
            ..:...|......:: |.|.:|||:..|:..|..||  |.......|:|..|:|:.|.|.||:..
Mosquito   197 EGVAKLIPRFFKCENKWDEDEILRVVGIIQVNGHEV--PMTEPSSVAIYNMASMLEHSCRPNLAK 259

  Fly   266 RFDDDMNIVFLAKRKIAKGEILSISYTQPLRSTIQRRVHLRQAKCFDCSCARCQDPEELGSFAGA 330
            .|.:...:|..|...|.:|:.|||.||..|.:|..|..||:|.|.|.|.|.||.|..|..::..|
Mosquito   260 SFTNRGEVVMWAPNPIRRGDRLSICYTDVLWTTGNRLEHLQQTKMFRCECERCSDRTEYETYFSA 324

  Fly   331 QTC------LKCKAGKIISLNPLLNSAPWKCQLCNFKRSAKDVVTSDAELQQELESLDKTTPVAL 389
            ..|      .||| |.::.::....:..|:|..|:.:.|...|.......:.:||:::|......
Mosquito   325 VRCSGFQKDSKCK-GFLLPVDNAQWTGEWQCLRCSKEVSGATVCQILERARMDLEAMEKHREDHC 388

  Fly   390 EEFIYRHRADLHETNTHILQAKYALTQLYGSAPGFAMEELSGESLNRKLQLCEELLKLADIFDGG 454
            ..::..:...|...:.:::..|.:|:|:.|.....|::::..|.|..|:::|::|:.|.:.....
Mosquito   389 NRYMKHYSKWLTANHQYMVDVKISLSQVIGGKNPEAIKKIPYEKLMNKIKICQDLIALFEKICPA 453

  Fly   455 WSIFRGNLLIDMEEALVTQALRSKD-------PLDCEEKLRNAAEMLREIRNIMKHEPEMQQLLL 512
            .:...|....::..||.....||.:       .:..|:.|.||.|.:|    ::.|||.|   |:
Mosquito   454 EARAFGATRFELHAALAELGRRSTEANNPAAAAVQLEDSLYNANECIR----MLLHEPSM---LM 511

  Fly   513 ERQV 516
            |.::
Mosquito   512 ESKI 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 15/36 (42%)
SET_SMYD <227..318 CDD:380997 33/90 (37%)
SmydA-1XP_309979.5 None

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