DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC1271020

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_061514761.1 Gene:LOC1271020 / 1271020 VectorBaseID:AGAMI1_009640 Length:337 Species:Anopheles gambiae


Alignment Length:224 Identity:48/224 - (21%)
Similarity:84/224 - (37%) Gaps:55/224 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFF-----AMRGLSVDPDLMT-LTSVISACELL 310
            ::.:|.|..|.:..|||..   :|.:.||..:.::     |:..|...|.|:. |.:..:.| |.
Mosquito   175 VVLERTPHSDFVFANAMRD---KNYIGHEYFKHYYFVRKNALPQLHFWPHLVVYLNTPTNKC-LE 235

  Fly   311 GDRRLGRDIHAYVITTGF--AVDISVCNSLTQMYLN-----AGSWR---EAEKLFSRMERKDI-- 363
            ..:|.|.......:...:  .::.|..:||.: |.|     |..|.   :.:.:...:||.|:  
Mosquito   236 NIKRRGNTDEIATVDERYLKTIEESYKDSLRE-YRNHSKILAYDWTKPGDTDAVVEDIERLDLDF 299

  Fly   364 ---------VSWTTMISGYEYNFLPDKAIDTY--RMMDQDSVKPDEITVAAVLSACATLGDL--- 414
                     ..|.|::....:|.......:.|  ||:..|.:...|:            |:|   
Mosquito   300 FEWHSGDVMEEWNTIVDSVGWNGWRQYVTNKYDARMLAFDGIPKHEV------------GELYTN 352

  Fly   415 --DTGVELH---KLAIKARLISYVIVANN 438
              |||..||   |..:|:. ..|..:|.|
Mosquito   353 PRDTGHFLHVMRKEVLKSP-YGYGYIAKN 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 18/71 (25%)
LOC1271020XP_061514761.1 None
Blue background indicates that the domain is not in the aligned region.

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