DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC1270688

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_061514039.1 Gene:LOC1270688 / 1270688 VectorBaseID:AGAMI1_010389 Length:632 Species:Anopheles gambiae


Alignment Length:385 Identity:85/385 - (22%)
Similarity:135/385 - (35%) Gaps:138/385 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QCFEIATNEVLGRHLRATRDIKIGEQILKEAP----LVLGPKVASAPLCLGCHRNLLAPGKPRGN 107
            :|.|:..:...||||..|:.:|.|:.:|.|.|    |:...:......|....|..|.|      
Mosquito   208 KCVELRQDSEFGRHLVTTQHLKAGDVLLIEKPYANLLIDVERHVRCAFCQNEDRFTLIP------ 266

  Fly   108 YHKCSSCSWPL-CGKECEDSVH---HKAEC-----------QLMSG-----------SNFQSKI- 145
               |..|:..: |.:||.|..|   |:.||           .|..|           ::|...: 
Mosquito   267 ---CEGCTVTMYCSEECRDKAHKQYHRYECGVLRDCWRIVGHLFGGMVGLRTVATAIASFDQDLG 328

  Fly   146 ---NYVPGEEERKESA-------------YCVIMLL------RC-------------MH------ 169
               :::...:|...:|             |..:.:|      ||             :|      
Mosquito   329 GWNDHLNTLDETNVNAFTMDWNNATVSDIYDTVQVLATNQKRRCRKDLAELIFFASIVHRLLLER 393

  Fly   170 -----LKDKDPDAFLKLYNLEDHLKERLETPLYQVLRANLITFIKTVLGMKDWPEMDILRIAAIL 229
                 |.:.:|.....|::|   |...::|.|....|.:.:..::    :||  |.|       .
Mosquito   394 TDFGPLCESNPIRSKLLFDL---LLRHVQTSLINKKRVHHMEAVE----VKD--EED-------E 442

  Fly   230 DTN-------------TFEVRQP---RERRKIRALYPGAAMISHDCVPNMRHRFDDDMNIVFLAK 278
            |||             ..|..:|   .||....|:||.::|::|.||||:......|.....:|.
Mosquito   443 DTNEKVKDELNDYFDYDNEEGKPTHFEERPHAMAVYPLSSMLNHSCVPNVVPINLLDGRCAIVAI 507

  Fly   279 RKIAKGEIL-------SISYTQPLRSTIQRRVHLRQAKCFDCSCARCQ--------DPEE 323
            |.||..|.|       :|.:.:.:|.     ::|:....|.|||..||        ||||
Mosquito   508 RPIAAVEQLFDNLGTCTIRHGRSIRG-----IYLQDCYLFQCSCGACQSHVECAYTDPEE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 30/113 (27%)
LOC1270688XP_061514039.1 None
Blue background indicates that the domain is not in the aligned region.

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