DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and LOC1270660

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_061511731.1 Gene:LOC1270660 / 1270660 VectorBaseID:AGAMI1_014244 Length:615 Species:Anopheles gambiae


Alignment Length:336 Identity:77/336 - (22%)
Similarity:122/336 - (36%) Gaps:92/336 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 CFEIATNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVASAPL-CLGCHRNLLAPGKPRGNYHKC 111
            |.|:..|...|||:.|||.:|:|:.::.|.|||...|.:...: |..||      |:.......|
Mosquito   214 CLELRKNVEYGRHVVATRKLKVGDVVMIERPLVTVLKDSFRYVRCDFCH------GERPFTLIPC 272

  Fly   112 SSCSWPL-CGKECEDSV---HHKAECQLMSGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKD 172
            ..|:..: |.:||....   :|:.||.|:  .:.......||        ...:.|:...:...|
Mosquito   273 EGCTMAMYCSEECLSKAYNKYHRYECGLL--RDLWEVFEEVP--------LIAIRMIAIAIATFD 327

  Fly   173 KDPDAFLKLYNLEDHL---------------------------------KERLET--PLYQVLRA 202
            .:|:      .|:|||                                 :||.::  ..:.:..|
Mosquito   328 NNPE------TLKDHLNALDESNVNGFTMDWNKATQQDIFNTVHVLTTNQERRDSIFVAFHIFNA 386

  Fly   203 NLI-TFI--KTVLG------------MKDWPEMDILRIAAI-------LDTNTFEVRQPRERRKI 245
            .:: |.|  :|.||            :.|.    |||...|       |..|.::|::.......
Mosquito   387 TILHTLILERTELGPVCGANPAFNKFLLDL----ILRYMQIVNCNRKLLSFNAYKVKEYVAESFA 447

  Fly   246 RALYPGAAMISHDCVPNM-RHRFDDDMNIVFLAKRKIAKGEILSISYT--QPLRSTIQRRVHLRQ 307
            ...||..:|::|.|.||: |....|....||:. |.:.:|..|..||.  ..|.....|:..|..
Mosquito   448 VGCYPLISMLNHSCAPNVQRITLRDGRCAVFVI-RPVLEGSQLFDSYETGHTLHEREMRQSMLSF 511

  Fly   308 AKCFDCSCARC 318
            ...|.|:|..|
Mosquito   512 MYSFQCTCEAC 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 26/100 (26%)
LOC1270660XP_061511731.1 None
Blue background indicates that the domain is not in the aligned region.

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