DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SmydA-2

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_309220.6 Gene:SmydA-2 / 1270515 VectorBaseID:AGAMI1_014742 Length:519 Species:Anopheles gambiae


Alignment Length:476 Identity:214/476 - (44%)
Similarity:299/476 - (62%) Gaps:10/476 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLTSCALCQAKASQLCAACRNVVYCSREHQKEHWKKGHRSECQCFEIATNEVLGRHLRATRDIKI 69
            |.|.|.:|.|.|.|.||.|:.|.||.|:||:..||..||.:|:.|::..|:.|||||.|||.||.
Mosquito     2 SSTVCRVCSAPAMQRCAGCQQVGYCGRDHQRADWKAQHRDQCRRFKVVRNDRLGRHLVATRHIKQ 66

  Fly    70 GEQILKEAPLVLGPKVASAPLCLGCHRNLLAP-GKPRG--NYHKCSSCSWPLCGKECEDSVHHKA 131
            ||.|.::.|..:|||:|:.||||||:|||:|. ...||  .:|:||.|.|||||..||:...|:.
Mosquito    67 GEIIYRDEPYAVGPKIANVPLCLGCNRNLMAGWDATRGLDRFHECSRCGWPLCGPGCEEVAQHRP 131

  Fly   132 ECQLMSGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKDKDPDAFLKLYNLEDHLKERLETPL 196
            ||.:::||.::..|...|...|::|||||||:.||.:.|:...|:.:..:...|.||.|||.:||
Mosquito   132 ECSVLAGSGYRPNIRPNPSNPEQRESAYCVIVPLRVLLLERIAPERYATVQGFESHLDERLASPL 196

  Fly   197 YQVLRANLITFIKTVLGMKDWPEMDILRIAAILDTNTFEVRQPRERRKIRALYPGAAMISHDCVP 261
            |.|||:||:.|::.||.::.:.|..:|:::||||||.:|:|.|.:..|:|.|||..||:||||.|
Mosquito   197 YGVLRSNLVPFLRQVLRLQQYSEQTVLKLSAILDTNCYEIRLPEQHVKVRGLYPLGAMLSHDCRP 261

  Fly   262 NMRHRFDDDMNIVFLAKRKIAKGEILSISYTQPLRSTIQRRVHLRQAKCFDCSCARCQDPEELGS 326
            |.:|.|||.:::|.:|...|..|.::..||||||..|:|||:.|||||||||.|.||.||.|.|:
Mosquito   262 NTKHYFDDRLHMVLVATVDIPAGGVIHASYTQPLLGTVQRRLALRQAKCFDCCCERCADPTEYGT 326

  Fly   327 FAGAQTCLKCK--AGKIISLNPLLNSAPWKCQ--LCNFKRSAKDVVTSDAELQQELESLDKTTPV 387
            .|....|..|:  ...::::.|......|:||  .|.::......|.....:||||.:||:|.|.
Mosquito   327 SASGFRCPNCRRTPSLVLAVEPTNYRTVWRCQNRRCAYQERPDQYVARCERMQQELLALDRTEPA 391

  Fly   388 ALEEFIYRHRADLHETNTHILQAKYALTQLYGSA-PGFAMEELSGESLNRKLQLCEELLKLADIF 451
            ..|||:.||...||..|.::||||||||||.||| |  |....|..:..|.::||.:||.:|:..
Mosquito   392 GYEEFLARHATTLHPWNAYMLQAKYALTQLLGSARP--AKAPPSEAAARRTVELCRDLLAVAERL 454

  Fly   452 DGGWSIFRGNLLIDMEEALVT 472
            :.|:|.||..||:::..||.|
Mosquito   455 EPGYSTFRAKLLLELGSALAT 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 18/36 (50%)
SET_SMYD <227..318 CDD:380997 50/90 (56%)
SmydA-2XP_309220.6 None

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