DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and SmydA-4

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_061514871.1 Gene:SmydA-4 / 1268645 VectorBaseID:AGAMI1_003090 Length:528 Species:Anopheles gambiae


Alignment Length:525 Identity:156/525 - (29%)
Similarity:247/525 - (47%) Gaps:73/525 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HQKEHWKK------GHRSE----CQCFE----------------IATNEVLGRHLRATRDIKIGE 71
            |:|:..||      .|..|    |..::                :..:|.:||::.|.||:|.|:
Mosquito     5 HKKKKQKKYDPPKLNHSKEIINPCSEYDRQPVAEVQLESSKPYLVKRSEQVGRYIVAARDLKAGD 69

  Fly    72 QILKEAPLVLGPKVASAPLCLGCHRNLLAPGKPRGNYHKCSSCSWPLCGKECED----SVHHKAE 132
            .|::..|.|:||...:.|:||||| |...||..   .::|..|:|.:|...|..    ..|.:.|
Mosquito    70 VIIETPPFVVGPCAETEPVCLGCH-NAFKPGSV---VYRCEICNWRICSPSCHGLAPAGTHRQLE 130

  Fly   133 C----------QLMSGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKDKDPDAFLKLYNLEDH 187
            |          .|.:....|.|:.|.            .|:.||||.||..|...:.:|..::..
Mosquito   131 CIPLRDKAVHKHLQTSPTAQVKLMYE------------AILTLRCMLLKTVDRPQYDRLLGMDPL 183

  Fly   188 LKERLETP-LYQVLRANLITFIKTVLGMKDWPEMDILRIAAILDTNTFEVRQPRERRKIRALYPG 251
            ...|.:.| |:...:..::..|:...|..::.|:::..|..|::.|.|||.|  |..|.|||:|.
Mosquito   184 NDVRQQIPKLWNRNQKEIVERIRNQWGFAEYSELELHTICGIIEVNAFEVGQ--EPTKARALFPE 246

  Fly   252 AAMISHDCVPNMRHR-FDDDMNIVFLAKRKIAKGEILSISYTQPLRSTIQRRVHLRQAKCFDCSC 315
            |.::.|||.||..|. .....::.....|.:..||.|:::|...|:.|::||.|||:.|.|.|:|
Mosquito   247 AYLLMHDCTPNTGHTDAPQTHHLTVRVLRDVKAGEPLTLTYAHILQGTLKRRQHLREEKFFSCNC 311

  Fly   316 ARCQDPEELGSFAGAQTCLKCKAGKIISLNPLLNSAPWKCQLCNFKRSAKDVVTSDAELQQELES 380
            .||.||.|||:...|..|.||..|.|:..:||.....|.|:.|:...|.:.|:....:|.|:||:
Mosquito   312 RRCTDPSELGTNCSALRCKKCPRGHILPTDPLNPETEWHCRQCSTVMSCEAVILLLEQLSQQLET 376

  Fly   381 LDKTTPVALEEFIYRHRADLHETNTHILQAKYALTQLYGSAPGFAMEELSGESLNRKLQLCEELL 445
            :.......||.|:....|.||:.:..:|..|::|.:|||...||.:.:||.|.|.||..||.:||
Mosquito   377 IGGNDVDGLETFLRVQGAVLHDNHYLLLSVKHSLCELYGKIEGFLIPQLSREQLKRKETLCRDLL 441

  Fly   446 KLADIFDGGWSIFRGNLLIDMEEALVTQA---------LRSKDPLDCEEKLRNAAEMLREIRNIM 501
            ::.|..:.|.|..||.::.:|...|:.:|         .|:    :...:|:....:|:|...|:
Mosquito   442 EVVDQLEPGLSRLRGTIMYEMHVPLLIEAGQLFQGGVIQRA----ELRRRLKEVQRLLKESERIL 502

  Fly   502 KHEPE 506
            ..|||
Mosquito   503 ALEPE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 6/22 (27%)
SET_SMYD <227..318 CDD:380997 35/91 (38%)
SmydA-4XP_061514871.1 None

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