DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and smyd2

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_002934751.2 Gene:smyd2 / 100495522 XenbaseID:XB-GENE-985583 Length:430 Species:Xenopus tropicalis


Alignment Length:506 Identity:109/506 - (21%)
Similarity:176/506 - (34%) Gaps:155/506 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GRHLRATRDIKIGEQILKEAPLVLGPKVASAPLCLGCHRNLLAPGKPRGNY-----------HKC 111
            ||.|:|||            |..||..:.|.|    .:..:|...: |||:           .||
 Frog    16 GRGLKATR------------PFALGELLFSCP----AYTYVLTVNE-RGNHCEFCFARKEGLSKC 63

  Fly   112 SSCSWPL-CGKECE--DSVHHKAECQLMS--GSNFQSKINYVPGEEERKESAYCVIMLLRCMHLK 171
            ..|.... |..:|:  |...||.||..|.  |.      |:.|.|..|..:.   |:..:....:
 Frog    64 GKCKQAFYCNVDCQKGDWPMHKLECSAMCTYGQ------NWCPSETVRLTAR---ILAKQKTQTE 119

  Fly   172 DKDPDAFLKLYNLEDHL----KERLETPLYQVLRANLITFIKTVLGMKDWPEMDILRIAAILDTN 232
            ....:.||.:.:.|.||    .|:||  |.|...|.|..|....|...|......|  .|.::.|
 Frog   120 RTASERFLSVKDFESHLSKLDNEKLE--LIQNDIAALHRFYSKNLHYSDNAAQVFL--FAQVNCN 180

  Fly   233 TFEVRQPRERRKIRALYPGAAMISHDCVPNMRHRFDDDMNIVFLAKRKIAKGEILSISYTQPLRS 297
            .|.:..........|::|..|:::|.|.||:...:...:..| .|.::|..|:.:..||...|..
 Frog   181 GFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTVAEV-RAVQEIHAGDEVFTSYIDLLYP 244

  Fly   298 TIQRRVHLRQAKCFDCSCARC----QDPEELGSFAGAQTCLKCKAGKIISLNPLLNSAPWKCQLC 358
            |..|...|..:..|:|.|..|    :||.:|               :|..|              
 Frog   245 TEDRNDRLIDSYFFNCDCRECSTKQKDPAKL---------------EIRKL-------------- 280

  Fly   359 NFKRSAKDVVTSDAELQQELESLDKTTPVALEEFIYRHRADLHETNTHILQAKYALTQLYGSAPG 423
                       ||....|.:..:.|.....:|||   .||..::|.:.:                
 Frog   281 -----------SDPPSPQVVRDMIKYARNVVEEF---RRAKHYKTPSEL---------------- 315

  Fly   424 FAMEELSGESLNRKLQLCE-ELLKLADIFDGGWSIFRGNLLID-MEEALVTQALRSKDPLDCEEK 486
                          |::|| .|.|:..:|:.. :::..:::.. |...|..|        |.|..
 Frog   316 --------------LEICELSLEKMGSVFEDS-NVYMLHMMYQAMGVCLYMQ--------DWEGA 357

  Fly   487 LRNAAEMLREIRNIMKHEP-----------EMQQLL--LERQVILSSALER 524
            |:...::   |:...||.|           ::.:|.  ||::.|.:.||::
 Frog   358 LKYGEKI---IKPYSKHYPPYSLNVASMWLKLGRLYMGLEKKAIGTKALKK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 23/90 (26%)
smyd2XP_002934751.2 SET_SMYD2 5..267 CDD:380979 72/281 (26%)
zf-MYND 50..88 CDD:460312 8/37 (22%)
Blue background indicates that the domain is not in the aligned region.

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