DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3808 and Trmt2b

DIOPT Version :9

Sequence 1:NP_649083.2 Gene:CG3808 / 40074 FlyBaseID:FBgn0036838 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001161466.1 Gene:Trmt2b / 215201 MGIID:2442530 Length:493 Species:Mus musculus


Alignment Length:483 Identity:174/483 - (36%)
Similarity:254/483 - (52%) Gaps:44/483 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LNGYKWKGK----VLKAHVAKASADPLQKKRAAEEQESERKPKKQRTAVEATCPLSHIAYDQQIK 177
            |.|..:||.    :.|.|   .|....|||     |...|....|....:...||..::|:.|:|
Mouse    34 LLGRAYKGSFTSVIAKKH---PSRQKYQKK-----QRHCRDDSWQERLADVVTPLWRLSYEAQLK 90

  Fly   178 QKSEEMSAL---LAKYTQELRKVNPRAKPHLD---KFQFHEVLPSPTVNGYRNKNEFTVGKNSVG 236
            .|.|....|   |..:.:.|..|:.....|..   :...|.::||||..|||||:.|:|.::..|
Mouse    91 VKFEAQKKLLQSLESHLKVLHGVSDTVAAHQSEGLRCLLHPIIPSPTTTGYRNKSTFSVYRSPDG 155

  Fly   237 E-VVVGFRLGCYSDGSVEVAEVADLPHLPEQAKWAARSFQDLVRKSKFLP---FNPDGNIGHFRQ 297
            . ..||:.||.:.||:|.......|.::||:....|:.::..:|:|...|   |: :|  ||:|:
Mouse   156 NPKTVGYYLGTWKDGNVVCLPCNHLKNIPEKHSQVAQYYEVFLRQSSVEPCLLFH-EG--GHWRE 217

  Fly   298 LMVRCSSATGELMLVAGIYSSNLSEDEQVELKQELKSFYEDLANDAPYKCSSLYYQDVKHREAGQ 362
            |:|| ::..|..|.:...:...|||:|....|..||.|:.. ...|..:.:|||:|:........
Mouse   218 LVVR-TNRQGHTMAIVTFHPQGLSEEEVCVQKVTLKDFFTK-GPGAICELTSLYFQESTMTRCSH 280

  Fly   363 TINPVEHISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPTKDTTMLDICCGTG 427
            ..:|.:.:.|..||.:.:.||:.||||.|||||||.||.:||:...:|.....::.:||||||||
Mouse   281 QQSPYQLLFGEPHIFEDLLGLKIRISPDAFFQINTAGAEMLYRIIGELSGVNSESLLLDICCGTG 345

  Fly   428 TITLAFAKHCKKVMGVEIVPDAIKDAEFNAEANGIKNAKFFTGNAD----DFIKSMVREALYDQE 488
            .|.|:.|:...:|.|:|:|..|::||.:.|..||:.|.:|..|.|:    ..:||...|.|    
Mouse   346 VIGLSVAQRASQVHGIELVEQAVEDARWTAAFNGVTNCEFHAGRAETILPQLLKSQKDEKL---- 406

  Fly   489 PGKPLDLIAVVDPPRAGLHHRSIAAIRSADAINRLVYVSCNPH-SAKRNFIELARP--ESKQYKG 550
                  .:|||:|.|||||:|.:.|||:...|:.||:|||.|| .:.||||||..|  .:||..|
Mouse   407 ------TVAVVNPARAGLHYRVVRAIRNCRTIHTLVFVSCKPHGESTRNFIELCCPPNSAKQLLG 465

  Fly   551 EPFYPKSAVAVDMFPHTMHTELVILFER 578
            :||..:.||.||:||||.|.|||:||.|
Mouse   466 DPFVLREAVPVDLFPHTPHCELVLLFTR 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3808NP_649083.2 RRM_TRMT2A 56..134 CDD:240885 6/20 (30%)
TrmA 57..571 CDD:225174 168/474 (35%)
AdoMet_MTases 276..579 CDD:302624 125/313 (40%)
Trmt2bNP_001161466.1 TrmA 83..486 CDD:225174 153/417 (37%)
AdoMet_MTases <290..490 CDD:302624 95/209 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54357
OrthoDB 1 1.010 - - D248059at2759
OrthoFinder 1 1.000 - - FOG0001356
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1692
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.860

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