DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and PGC1

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_015118.1 Gene:PGC1 / 855895 SGDID:S000006127 Length:321 Species:Saccharomyces cerevisiae


Alignment Length:207 Identity:48/207 - (23%)
Similarity:78/207 - (37%) Gaps:78/207 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 VGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQI 520
            ||||    ::.|..|   |||:.:|..|:...||:||.|:.:|:||:.|:.||     :..|:..
Yeast     5 VGHR----AFKARYP---ENTLLAFEKAYAAGADVIETDLQMTSDGMVVVNHD-----SDTGRMW 57

  Fly   521 SRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFPTLVEVLEKLPKSLGI 585
            .:     .::|.:..:|.:||||        .:|..|         ....||.|:|         
Yeast    58 DK-----NLVIGESTWEEVKRLR--------CKEDGS---------LAMMTLKEIL--------- 91

  Fly   586 DVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQVIQKGCGRPIIFSSFDADMCTMLRFKQNVFPV 650
                .|.....|    |:..:|..|..:|:|                       |::    .|.:
Yeast    92 ----TWAVCHPG----AKLMLDIKFTNEKII-----------------------MIK----TFVI 121

  Fly   651 MFLTQGETKKWQ 662
            |...:.:.|.||
Yeast   122 MLEVKNDLKFWQ 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 48/207 (23%)
PGC1NP_015118.1 GDPD_YPL206cp_fungi 4..244 CDD:176512 48/207 (23%)
Blue background indicates that the domain is not in the aligned region.

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