DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and GDPD4

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_177290.3 Gene:GDPD4 / 843475 AraportID:AT1G71340 Length:328 Species:Arabidopsis thaliana


Alignment Length:234 Identity:48/234 - (20%)
Similarity:87/234 - (37%) Gaps:74/234 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 YSPL---DFKNT--------------YAHYWPK----------SW---PNLDVGHRGNGKSYIAD 468
            :|||   :||.|              |.|:..:          .|   |.|...|.|       |
plant    24 FSPLYSRNFKRTILFAVIFLAIFPPLYFHFKLRRIRQIVAQKCDWLHHPPLVCAHGG-------D 81

  Fly   469 APAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQISRPDQLEYVLIKD 533
            :.....||:.::..|.....|.||:||..::|||....|:..|      ::|:|...::   :.|
plant    82 STLAFPNTMDAYSFAIRSRVDCIEVDVSRSSDGVLFALHNRDL------QRIARNSSVQ---VGD 137

  Fly   534 INYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFPTLVEVLEKLPKSLG---IDVEIKWPQRR 595
            ::.:.:|.|.:..::.|.:.           ..|| |||.|.|..:..|:.   :|.::..|...
plant   138 LSMKQIKELDVSEIVKGTLG-----------SSRI-PTLEEALALISNSVRKVILDAKVGPPMYE 190

  Fly   596 QGGGSEAEQTIDKNFFADKVIHQVIQKGCGRPIIFSSFD 634
            :|             .|..::..:.:..|...|:::..|
plant   191 KG-------------LAQDILSIIERAQCNNCIVWAKSD 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 38/184 (21%)
GDPD4NP_177290.3 UgpQ 73..313 CDD:440349 38/185 (21%)
Blue background indicates that the domain is not in the aligned region.

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