DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and SVL2

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001185333.1 Gene:SVL2 / 843015 AraportID:AT1G66970 Length:785 Species:Arabidopsis thaliana


Alignment Length:285 Identity:48/285 - (16%)
Similarity:82/285 - (28%) Gaps:85/285 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   476 TIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQISRPDQLEYVLIKDINYELLK 540
            |..::..|.:..||:|:..|.:::||||.......||.:                          
plant   404 TDLAYEKAIKDGADVIDCSVQMSSDGVPFCLRSIDLRNS-------------------------- 442

  Fly   541 RLRIFSVIAGQVREYPSHNAEPRMEHRIFPTLVEVLEKLPKSLGI-DVEIKWPQRRQGGGSEAEQ 604
                   ||.....:.:.:           |.|..:..:|   || ...:.||:.:     ....
plant   443 -------IAALQNTFSNRS-----------TSVPEISSVP---GIFTFSLTWPEIQ-----SLTP 481

  Fly   605 TIDKNFFADKVIHQVIQKGCGRPIIFSSF---------------DADMCTMLRFKQNVFPVMFLT 654
            .|...|...::.....:|..|:.|..|.|               ..:....||.||.:..|..:.
plant   482 AISNPFRVYRIFRNPREKNSGKLISLSQFLDLAKTYTSLSGVLISVENAAYLREKQGLDVVQAVL 546

  Fly   655 QGETKKWQPFLDLRTRTFIAAVNNAQAFELA-----GTAPHAEDFLGENASEMLRKAKDLGQIAV 714
            ...|:.........|:..|.:.|::...:..     .|....|:.:|......:...|......|
plant   547 DTLTEAGYSNGTTTTKVMIQSTNSSVLVDFKKQSKYETVYKIEETIGNIRDSAIEDIKKFANAVV 611

  Fly   715 IWGD------------DCNSKERVQ 727
            |..|            ..|..||:|
plant   612 INKDSVFPNSDSFLTGQTNVVERLQ 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 48/285 (17%)
SVL2NP_001185333.1 GDPD_SHV3_repeat_1 72..371 CDD:176545
GDPD_SHV3_repeat_2 388..689 CDD:176546 48/285 (17%)
Blue background indicates that the domain is not in the aligned region.

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