DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and SVL5

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_200625.1 Gene:SVL5 / 835929 AraportID:AT5G58170 Length:750 Species:Arabidopsis thaliana


Alignment Length:628 Identity:122/628 - (19%)
Similarity:211/628 - (33%) Gaps:193/628 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 VEDLSGYKQIRRW-----ETHFKPRSLGPCTELQCSQLDVFGITSDNSDLKPQVHRGWLNHEAIL 294
            |||:.|.|..:.|     :..:....|.|...|:..|.....:.|     .|::  |:|....:.
plant   157 VEDVLGTKPPKFWLSVQYDAFYMEHKLSPAEYLRSLQFRGINVIS-----SPEI--GFLKSIGMD 214

  Fly   295 QLKFNGEKMFQVHDIETFDPQHVQLKIVPVEKTAGLHVEYSKQEYGKSQLELQPTFGVPYTKGDI 359
            ..:...:.:|:..|.|..:|.                   :.::|.:.|..|...  ..:..|.:
plant   215 AGRAKTKLIFEFKDPEAVEPT-------------------TNKKYSEIQQNLAAI--KAFASGVL 258

  Fly   360 VIFHITLPLERMMEQHFRLECYSMSNELLGSATLVTSDLTGSEGVLH---LPIKSAKNADETLAR 421
            |......|::              |.:.|..||...:|       .|   |.:.::..|::    
plant   259 VPKDYIWPID--------------SAKYLKPATTFVAD-------AHKAGLEVYASGFAND---- 298

  Fly   422 LRLPYVAVQPYRYSP-------------------LDFKNT-------YAHY---WPKSWPNLDVG 457
            ||..:    .|.|.|                   .||..|       ::|.   .||:...|.:.
plant   299 LRTSF----NYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKAGHALVIT 359

  Fly   458 HRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPP------ 516
            |  ||.|  .|.|.   .|..::..|.:..||:|:..|.::.||: ...||....||..      
plant   360 H--NGAS--GDYPG---CTDLAYQKAVDDGADVIDCSVQMSKDGI-AFCHDAADLTASTTAMTIF 416

  Fly   517 -GKQISRPD----------QLEYVLIKDINYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFP 570
             .:..|.|:          .|.:..|:.:..::....    ...|..|...:.||..      |.
plant   417 MSRATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPF----TATGFQRNPANKNAGK------FI 471

  Fly   571 TLVEVLE--KLPKSLGIDVEIK---WPQRRQGGG-------SEAEQTIDKNFFADKVIHQVIQKG 623
            ||.:.|:  |.....|:.:.|:   :...::|.|       :.|:.|:||. ...||:.|.....
plant   472 TLADFLDFSKAKAVTGVMINIENAAYLASKKGLGVVDAVKSALAKSTLDKQ-STQKVLIQSDDSS 535

  Fly   624 CGRPIIFSSFDA--DMCTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELAG 686
                 :.:||:|  ....:|...:.:......:..|.||:...::| .||.:..|  :|:|....
plant   536 -----VLASFEAVPPYTRVLSIDKEIGGAPKPSVDEIKKYAEAVNL-LRTSLVTV--SQSFTTGK 592

  Fly   687 TAPHAEDFLGENASEMLRKAKDLGQIAVIWGD------DCNSKERVQYFTRIG------------ 733
            |          |..|.:.|......::|:..:      |..|...::..|.|.            
plant   593 T----------NVVEEMHKGNISVYVSVLRNEYISVAFDYFSDPTIELATFISGSGVDGVITEFP 647

  Fly   734 ATATCYDR---SDLFMPEGKREAFFKSPA------LMAEFAAQ 767
            ||||.|.:   |||    .|.:.:...||      ::|:..||
plant   648 ATATRYLKSPCSDL----NKEQPYAILPAEAGGLVVVADKEAQ 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 13/57 (23%)
GDPD_GDE5 454..741 CDD:176549 70/335 (21%)
SVL5NP_200625.1 GDPD_SHV3_repeat_1 41..338 CDD:176545 40/237 (17%)
GDPD_SHV3_repeat_2 355..653 CDD:176546 69/334 (21%)

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