DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and SVL4

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_200613.2 Gene:SVL4 / 835917 AraportID:AT5G58050 Length:753 Species:Arabidopsis thaliana


Alignment Length:594 Identity:116/594 - (19%)
Similarity:196/594 - (32%) Gaps:180/594 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 VEDLSGYKQIRRW-----ETHFKPRSLGPCTELQCSQLDVFGITSDNSDLKPQVHRGWLNHEAIL 294
            |||:.|.|..:.|     :..:....|.|...|:..:.....:.|     .|::  |:|....:.
plant   157 VEDVLGTKPPKFWLSVQYDAFYMEHKLSPAEYLRSLRFRGINVIS-----SPEI--GFLKSIGMD 214

  Fly   295 QLKFNGEKMFQVHDIETFDPQHVQLKIVPVEKTAGLHVEYSKQEYGKSQLELQPTFGVPYTKGDI 359
            ..:...:.:|:..|.|..:|.                   :.::|.:.|..|...  ..:..|.:
plant   215 AGRAKTKLIFEFKDPEAVEPT-------------------TNKKYSEIQQNLAAI--KAFASGVL 258

  Fly   360 VIFHITLPLERMMEQHFRLECYSMSNELLGSATLVTSDLTGSEGVLH---LPIKSAKNADETLAR 421
            |......|::              |.:.|..||...:|       .|   |.:.::..|::    
plant   259 VPKDYIWPID--------------SAKYLKPATTFVAD-------AHKAGLEVYASGFAND---- 298

  Fly   422 LRLPYVAVQPYRYSP-------------------LDFKNT-------YAHY---WPKSWPNLDVG 457
            ||..:    .|.|.|                   .||..|       ::|.   .||:...|.:.
plant   299 LRTSF----NYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKAGHALVIT 359

  Fly   458 HRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFG-------LRTAP 515
            |  ||.|  .|.|.   .|..::..|.:..||:|:..|.::.||: ...||..       .||..
plant   360 H--NGAS--GDYPG---CTDLAYQKAIDDGADIIDCSVQMSKDGI-AFCHDAADLSASTTARTTF 416

  Fly   516 PGKQISRPD----------QLEYVLIKDINYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFP 570
            ..:..|.|:          .|.:..|:.:..::....    ...|..|...:.||..      |.
plant   417 MSRATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPF----TATGFQRNPANKNAGK------FT 471

  Fly   571 TLVEVLE--KLPKSLGIDVEIK---WPQRRQGGG-------SEAEQTIDKNFFADKVIHQVIQKG 623
            ||.:.||  |.....|:.:.|:   :...::|.|       :....|:||. ...||:.|.....
plant   472 TLADFLELGKAKAVTGVLINIQNAAYLASKKGLGVVDVVKSALTNSTLDKQ-STQKVLIQSDDSS 535

  Fly   624 CGRPIIFSSFDA--DMCTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELAG 686
                 :.|||:|  ....:|...:.:......:..|.||....::| .||.:..|  :|:|....
plant   536 -----VLSSFEAVPPYTRVLSIDKEIGDAPKTSIEEIKKHADAVNL-LRTSLITV--SQSFATGK 592

  Fly   687 TAPHAEDFLGENASEMLRKAKDLGQIAVIWGD------DCNSKERVQYFTRIG------------ 733
            |          |..|.:.||.....::|:..:      |..|...::..|.|.            
plant   593 T----------NVVEEMHKANISVYVSVLRNEYIAIAFDYFSDPTIELATFIAGRGVDGVITEFP 647

  Fly   734 ATATCYDRS 742
            ||||.|.||
plant   648 ATATRYLRS 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 12/57 (21%)
GDPD_GDE5 454..741 CDD:176549 72/335 (21%)
SVL4NP_200613.2 GDPD_SHV3_repeat_1 41..338 CDD:176545 39/237 (16%)
GDPD_SHV3_repeat_2 355..653 CDD:176546 71/334 (21%)

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