DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and SHV3

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_567755.1 Gene:SHV3 / 828776 AraportID:AT4G26690 Length:759 Species:Arabidopsis thaliana


Alignment Length:610 Identity:120/610 - (19%)
Similarity:211/610 - (34%) Gaps:210/610 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 GTGNELESGSGSSAACKPTLREFNVRLEVPLAAEERLGLTGDVKALGEWQLSRSVALE--SLDEL 213
            |..|.:.:....|...||:....||:.:. ..|:..|.::..:.|     .|::|.::  |..|:
plant   152 GNSNPIMTVQSVSTQMKPSFFWLNVQHDA-FYAQHNLSMSSFLVA-----ASKTVLIDFISSPEV 210

  Fly   214 NWQATVALQSCR---QLEYRYFVYVEDLSGYKQIRRWETHFKP---RSLGP-CTELQCSQLDVFG 271
            |:...:|.:..|   .|.:|:.              .:..|:|   |:.|. .:.|...:....|
plant   211 NFFKKIAGRFGRNGPSLVFRFL--------------GQDEFEPTTNRTYGSILSNLTFVKTFASG 261

  Fly   272 ITSDNSDLKPQVHRGWL---------NHEAILQLKFNG--EKMFQVHDIETFDPQHVQLKIV--- 322
            |....|.:.|...:.:|         .|:|.|::..:|  ..:...||. :|||....|..|   
plant   262 ILVPKSYILPLDDQQYLLPHTSLVQDAHKAGLEVFVSGFANDIDIAHDY-SFDPVSEYLSFVDNG 325

  Fly   323 -----------PVEKTAGL----HV--EYSKQ-------------EY-GKSQLELQPTFGVPYTK 356
                       |:..:|.|    ||  ..:||             :| |.:.|        .|.|
plant   326 NFSVDGVLSDFPITASASLDCFSHVGRNATKQVDFLVITKDGASGDYPGCTDL--------AYKK 382

  Fly   357 -----GDIVIFHITLPLERMMEQHFRLECYSMSNELLGSATLVTSDLTGSEGVLHLPIKSAKNAD 416
                 .|::...:.|..:...        :.:|:..||::|.|:             :.:.:|..
plant   383 AIKDGADVIDCSVQLSSDGTP--------FCLSSIDLGNSTTVS-------------LTAFRNRS 426

  Fly   417 ETLARL---------RLPYVAVQ--------PYRYSPLDFKNTYAHYWPKSWPNLDVGHRGNGKS 464
            .|:..|         .|.:..:|        |||.:.| |:|      ||        .:..||.
plant   427 TTVPELGSLGAIYTFSLTWAEIQTLTPAISNPYRVTSL-FRN------PK--------QKNAGKL 476

  Fly   465 Y-IAD--APAERENTIASFLSAHEHHADMIE---LDV--------------HLTADGVPV----- 504
            : ::|  :.|:...:::..|.:.|:.|.:.|   |||              :.||..|.:     
plant   477 FSLSDFLSLAKNSTSLSGVLISVENAAYLREEQGLDVVKAVLDTLTQTGYSNSTATKVMIQSTNS 541

  Fly   505 -IYHDFGLRTAPPGKQISRPDQLEYVL-----IKDINYELLKRLRIF--SVIAGQVREYPSHNAE 561
             :..||           .:..|.|.|.     |:||....::.::.|  :|:..::..:|     
plant   542 SVLVDF-----------KKQSQYETVYKVEENIRDILDSAIEDIKKFADAVVIQKLSVFP----- 590

  Fly   562 PRMEHRIFPTLVEVLEKLPKS-LGIDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIH---QVIQK 622
              :......|...|:|||.|| |.:.||:       .......|..|  ||||..:.   .:...
plant   591 --VAQSFITTQTNVVEKLQKSQLPVYVEL-------FQNEFLSQPYD--FFADATVEINSYITGA 644

  Fly   623 GCGRPIIFSSFDADMCTMLRFKQNV 647
            |....|....|     |..|:|:|:
plant   645 GINGTITEFPF-----TAARYKRNL 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 25/130 (19%)
GDPD_GDE5 454..741 CDD:176549 48/231 (21%)
SHV3NP_567755.1 GDPD_SHV3_repeat_1 44..343 CDD:176545 41/211 (19%)
GDPD_SHV3_repeat_2 360..660 CDD:176546 70/375 (19%)

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