DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and SRG3

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_566159.1 Gene:SRG3 / 821175 AraportID:AT3G02040 Length:361 Species:Arabidopsis thaliana


Alignment Length:301 Identity:78/301 - (25%)
Similarity:127/301 - (42%) Gaps:67/301 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 VGHRGNGKSYIADAP-----AERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAP 515
            |||||:|.: ::.:|     |.:||:|.||.:|.:...|.||.||.:|.||.|:|:||..:.:..
plant    37 VGHRGHGMN-MSQSPDLRFSALKENSILSFNAASKFPLDFIEFDVQVTRDGCPIIFHDDFIYSEE 100

  Fly   516 PG----KQISRPDQLEYVLIKDINY-----------ELLKRLRIFSVIAGQVREYPSHNAEPRME 565
            .|    |:::     |..|.:.::|           .||::.:     .|::.::.....:.   
plant   101 QGVVYEKRVT-----EVCLSEFMSYGPQRDTGKTGKPLLRKSK-----EGKIHKWSVATDDS--- 152

  Fly   566 HRIFPTLVEVLEKLPK-SLGIDVEIKWPQRRQGGGSEAEQTIDKNFFADK---------VIHQVI 620
               |.||.|..||:.. :||.::|:|               :|.|.|...         ::..|.
plant   153 ---FCTLQEAFEKVENPNLGFNIELK---------------LDDNVFYSSDHLSRLLLPILQVVS 199

  Fly   621 QKGCGRPIIFSSFDADMCTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELA 685
            ..|..|.||||||..|...::|..|..:||.|||.|.|:.:.   |.|..:...|:.......|.
plant   200 DIGNDRTIIFSSFHPDAALLVRKLQTTYPVFFLTNGGTEMYH---DTRRNSLEEAIKVCLEGGLQ 261

  Fly   686 GTAPHAEDFLGENASEMLRKAKDLGQIAVIWGDDCNSKERV 726
            |.....:......|  ::.|.|:.....:.:|...|..|.|
plant   262 GIVSEVKGVFRNPA--LVNKIKESKLSLMTYGKLNNVAEAV 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 78/301 (26%)
GDPD 458..744 CDD:281062 76/299 (25%)
SRG3NP_566159.1 PI-PLCc_GDPD_SF 35..316 CDD:387364 78/301 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 104 1.000 Domainoid score I2222
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D687958at2759
OrthoFinder 1 1.000 - - FOG0001717
OrthoInspector 1 1.000 - - mtm976
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22958
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1268
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.920

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