DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and Gpcpd1

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001342578.1 Gene:Gpcpd1 / 74182 MGIID:104898 Length:682 Species:Mus musculus


Alignment Length:670 Identity:197/670 - (29%)
Similarity:312/670 - (46%) Gaps:134/670 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 PTLREFNVRLEVPLAAEERLGLTGDVKALGEWQLSRSVAL----ESLDELNWQATVALQSCRQLE 228
            |:...|.:|  ..|...|...:.|...|||.|....:|||    |:.|.:.|:|.:||.....::
Mouse     3 PSQVTFEIR--GTLLPGEVFAICGSCDALGNWNPQNAVALINENETGDSVLWKAVIALNRGVSVK 65

  Fly   229 YRYF--VYVE--DLSGYKQ--IRRWETHFKPRSLGPCTELQCSQLDVFGITSDNSDLKPQVHRGW 287
            ||||  .::|  .:.|..|  :.:||||.:|||:.|                             
Mouse    66 YRYFRGCFLEPKTIGGPCQVIVHKWETHLQPRSITP----------------------------- 101

  Fly   288 LNHEAILQLKFNGEKMFQVHD-IETFD------PQHVQLKIVPVEKTAGLHVEYSKQEYGKSQLE 345
            |..|.|:.     :..|.:|: :||.|      ...::|::...||..   |..||:::.||:..
Mouse   102 LESEIIID-----DGQFGIHNGVETLDSGWLTCQTEIRLRLHFSEKPP---VSISKKKFKKSRFR 158

  Fly   346 LQPTF-GVPYTKGD-------IVIFHITLPLE-------RMMEQHFRLEC-----------YSMS 384
            ::.|. |:...:.|       .|:..::..||       ....:|.:.||           ||:.
Mouse   159 VKLTLEGLEEDEDDDDDKVSPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQ 223

  Fly   385 N------ELL----------------------GSATLVTSDLT---GSEGVLHLPIKSAKNADET 418
            .      ||:                      |:|.|::|.:.   .|.|:|.|||.| :|:.:|
Mouse   224 TMEPDNLELIFDFFEEDLSEHVVQGDVLPGHVGTACLLSSTIAESGRSAGILTLPIMS-RNSRKT 287

  Fly   419 LARLRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGNGKSYIADAPAE-RENTIASFLS 482
            :.::|:.::.::|........:::::.||....| |||||||.|.|......|: :||||||..:
Mouse   288 IGKVRVDFIIIKPLPGYSCSMQSSFSKYWKPRIP-LDVGHRGAGNSTTTAKLAKVQENTIASLRN 351

  Fly   483 AHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQI-------SRPDQLEYVLIKDINYELLK 540
            |..|.|..:|.||||:.|.|||:|||.........|:.       :.|.:|..:.:|::.::.|:
Mouse   352 AASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKRKKFVHTQKYEADPVELFEIPVKELTFDQLQ 416

  Fly   541 RLRIFSVIAGQVRE-----YPSHNAEPRMEHRIFPTLVEVLEKLPKSLGIDVEIKW-PQRRQG-G 598
            .|::..|.|.:.::     |...|.  ..|::.||:|..|||.||:::|.::|||| .|.|.| .
Mouse   417 LLKLSHVTALKTKDRKQSLYEEENF--FSENQPFPSLKMVLESLPENVGFNIEIKWICQHRDGVW 479

  Fly   599 GSEAEQTIDKNFFADKVIHQVIQKGCGRPIIFSSFDADMCTMLRFKQNVFPVMFLTQGETKKWQP 663
            ........|.|.|.|.::..|::....|.|:|||||||:|||:|.|||.:|::|||||::..:..
Mouse   480 DGNLSTYFDMNVFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPE 544

  Fly   664 FLDLRTRTFIAAVNNAQAFELAGTAPHAEDFLGENASEMLRKAKDLGQIAVIWGDDCNSKERVQY 728
            .:|||:||...|::.||...:.|...|.||.| .|.| .:::||..|.:...||||.|..|..:.
Mouse   545 LMDLRSRTTPIAMSFAQFENILGINAHTEDLL-RNPS-YVQEAKAKGLVIFCWGDDTNDPENRRK 607

  Fly   729 FTRIGATATCYDRSDLFMPE 748
            ....|.....|||...:|||
Mouse   608 LKEFGVNGLIYDRIYDWMPE 627

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 34/129 (26%)
GDPD_GDE5 454..741 CDD:176549 111/301 (37%)
GDPD 458..744 CDD:281062 109/300 (36%)
Gpcpd1NP_001342578.1 CBM20_Prei4 4..127 CDD:99888 41/158 (26%)