DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18135 and Gdpd2

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_076097.1 Gene:Gdpd2 / 71584 MGIID:1918834 Length:539 Species:Mus musculus


Alignment Length:338 Identity:75/338 - (22%)
Similarity:114/338 - (33%) Gaps:132/338 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 PKSWPNLDVGHRGNGKSYIADAP-AERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGL 511
            ||  |.| |||||        || ...|||:.|.....|..|.:.|.||.:::||||.:.||   
Mouse   223 PK--PGL-VGHRG--------APMLAPENTLMSLRKTAECGAAVFETDVMVSSDGVPFLMHD--- 273

  Fly   512 RTAPPGKQISRPDQLEYVL-------IKDINYELLKRLRI------------FSVIAGQVREYPS 557
                  :::||...:..|.       ..|.::..|:||..            ...::|..|:...
Mouse   274 ------ERLSRTTNVASVFPERISAHSSDFSWAELQRLNAGTWFLERQPFWGAKKLSGSDRKEAE 332

  Fly   558 HNAEPRME-----------------------HRIFPTLV-EVLEK-------------LPKSLGI 585
            :...|.:|                       |..:.|.| :.||.             ||.....
Mouse   333 NQTIPALEELLKEAAALNLSIMFDLRRPPRNHTYYDTFVNQTLEAVLSANVSQAMVLWLPDEDRA 397

  Fly   586 DVEIKWPQRRQ----GGGSEAEQTIDKNF-FAD------KVIHQ--------VIQKGCGRPIIFS 631
            :|:.:.|:.||    .||:..|:....|. :.|      |.:||        |:.|    |.:||
Mouse   398 NVQQRAPRMRQIYGHQGGNWTERPQFLNLPYQDLPALDIKALHQDNISVNLFVVNK----PWLFS 458

  Fly   632 --------SFDADMCTMLRFKQN---VFP--------------------VMFLTQGETKKWQPFL 665
                    |...:.|.:|:..||   :.|                    .:||.:|...| :...
Mouse   459 LLWCAGVDSVTTNACQLLQQMQNPLWLLPPQKYLMIWVITDCASILLLLSIFLLRGGCAK-RNRT 522

  Fly   666 DLRTRTFIAAVNN 678
            .|.|...:..:||
Mouse   523 GLETAVLLTKINN 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 72/332 (22%)
Gdpd2NP_076097.1 PI-PLCc_GDPD_SF 198..500 CDD:472694 67/300 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.