DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and Gdpd3

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_077190.2 Gene:Gdpd3 / 68616 MGIID:1915866 Length:330 Species:Mus musculus


Alignment Length:165 Identity:44/165 - (26%)
Similarity:72/165 - (43%) Gaps:49/165 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 HRGNGKSYIADAPAER-ENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQIS 521
            |||..        .|| |||:.:..::....||::|.|..||.|||.|:.||         |.:|
Mouse    44 HRGGS--------GERLENTMEAVENSMAQRADLLEFDCQLTRDGVVVVSHD---------KNLS 91

  Fly   522 RPDQLEYVLIKDINYELLKRLRIFSVIAGQVREY--PSHNAEPRMEHRIFPTLVEVLEKLPKSLG 584
            |...|.    ||:|....:.|.::.   .::..|  |.|.|.....|.|  :|.:|.:|.|:: .
Mouse    92 RQSGLN----KDVNTLDFEELPLYK---EELEIYFSPGHFAHGSDRHMI--SLEDVFQKFPRT-P 146

  Fly   585 IDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQV 619
            :.:|:|                ::|   :::||:|
Mouse   147 MCLEVK----------------ERN---EELIHKV 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 44/165 (27%)
GDPD 458..744 CDD:281062 44/165 (27%)
Gdpd3NP_077190.2 GDPD_GDE4 13..310 CDD:176553 44/165 (27%)
UgpQ 34..311 CDD:223657 44/165 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..330
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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