DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and Gdpd4

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_006229858.1 Gene:Gdpd4 / 680990 RGDID:1585799 Length:739 Species:Rattus norvegicus


Alignment Length:341 Identity:69/341 - (20%)
Similarity:107/341 - (31%) Gaps:134/341 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 YSPLDFKNTYAHYWPKSWPNLDVGHRGNGKSYIADAP-AERENTIASFLSAHEHHADMIELDVHL 497
            |||...|.  .:..||  |.| .||||        || ...|||:.||..|.|.....:|.|:::
  Rat   261 YSPCVLKK--ENLGPK--PAL-FGHRG--------APMLAPENTMMSFEKAVEFGVSGLETDIYV 312

  Fly   498 TADGVPVIYHDFGL-RTAP-----PGKQISRPDQLEYVLIKDINYELLKRLRIFSVIAGQ--VRE 554
            :.|.||.:.||:.| ||..     |....:......:..:..:|             |||  ::.
  Rat   313 SVDHVPFLMHDYDLTRTTNIIEVLPSAASNHSSNFNWTFLSSLN-------------AGQWFLKH 364

  Fly   555 YPSHNAEP-------RMEHRIFPTLVEVLEKLPKSLGIDVEIKWPQRRQGGGSEAEQTID----- 607
            .|....:|       |..::..|.|.|.||.                     ::.|:.|.     
  Rat   365 KPFFGMKPLSEADQKRAGNQSIPQLSEFLEL---------------------AKREEKIVLFDLF 408

  Fly   608 --------KNFFADKVIHQVIQKGCGRPIIFSSFDADMCTMLRFKQNVFPVMFLTQGETKKWQPF 664
                    :|.|..:|:..::.....:.:||                              |.|.
  Rat   409 GPPPGHPLRNTFVRRVVRVILDSKIEQRLIF------------------------------WLPG 443

  Fly   665 LDLRTRTFIAAVNNAQAFELAGTAPHAEDFLGENASEM--------------LRKAKDLGQIAVI 715
            .|   |.::..:  |..|:..|.....|:...:|.|.:              .:|||....:.||
  Rat   444 FD---REYVKYM--APGFQHVGRLWSIEELTQKNISIINVDYKRLFYSGLRDYKKAKIYIHVYVI 503

  Fly   716 ---------WGDDCNS 722
                     |..:.||
  Rat   504 NEPWLFSLAWCSNVNS 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 62/321 (19%)
Gdpd4XP_006229858.1 PI-PLCc_GDPD_SF 253..566 CDD:472694 69/341 (20%)
Blue background indicates that the domain is not in the aligned region.

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