DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and Gdpd1

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_079914.1 Gene:Gdpd1 / 66569 MGIID:1913819 Length:314 Species:Mus musculus


Alignment Length:209 Identity:51/209 - (24%)
Similarity:83/209 - (39%) Gaps:57/209 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 VGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQI 520
            :.|||.       |....|||:|:|..|.....||:|||.|:|.|...|:.||..|:.: .|..:
Mouse    43 ISHRGG-------AGENLENTMAAFQHAVTIGTDMLELDCHITKDEQVVVSHDANLKRS-TGVNV 99

  Fly   521 SRPD----QLEYVLIK-DINYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFPTLVEVLEKLP 580
            :..|    :|...|.| |:.::               |.......:.|:     |.|.||.|..|
Mouse   100 NVSDLKYCELPPYLCKLDVPFQ---------------RACKCEGKDTRI-----PLLKEVFEAFP 144

  Fly   581 KSLGIDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQVIQKGCGRPIIFSSFDA---DMCTMLR 642
            :: .|:::||               ::.|....||...|.|.......::.:.::   |.|    
Mouse   145 ET-PINIDIK---------------VNNNVLIKKVSELVKQYKREHLTVWGNANSEIVDKC---- 189

  Fly   643 FKQNV-FPVMFLTQ 655
            :|:|. .|::|..|
Mouse   190 YKENSDIPILFSLQ 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 51/209 (24%)
Gdpd1NP_079914.1 GDPD_GDE4 14..311 CDD:176553 51/209 (24%)
Blue background indicates that the domain is not in the aligned region.

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