DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and Gde1

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_116004.2 Gene:Gde1 / 60418 RGDID:621788 Length:331 Species:Rattus norvegicus


Alignment Length:345 Identity:78/345 - (22%)
Similarity:133/345 - (38%) Gaps:101/345 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   426 YVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGNGKSYIADAPAERENTIASFLSAHEHHADM 490
            |:.::.:.:.|:..:.......|:...:. :.|||...    |||   |||:|:...|.::.|..
  Rat    39 YLLLRFFSFEPVPSRRALQVLKPRDRVSA-IAHRGGSH----DAP---ENTLAAIRQAAKNGATG 95

  Fly   491 IELDVHLTADGVPVIYHDFGLRTAPPGKQISRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREY 555
            :|||:..|:|||||:.||..:.....|.  .|...|.:..::.:|.....|||         .|:
  Rat    96 VELDIEFTSDGVPVLMHDNTVDRTTDGS--GRLCDLTFEQVRKLNPAANHRLR---------NEF 149

  Fly   556 PSHNAEPRMEHRIFPTLVE-VLEKLPKSLGIDVEIKWPQRRQGGGSEAEQTIDKNF--------- 610
            |        :.|| |||.| |.|.|..:|.|..::|       |.::......||.         
  Rat   150 P--------DERI-PTLREAVTECLCHNLTIFFDVK-------GHADMASAALKNIYMEFPQLYN 198

  Fly   611 ------FADKVIHQVIQ------------------KGCGRPIIFSSFDADMCTMLRFKQNVFPVM 651
                  |..:||:::.|                  .|.|:| .:|.|         :||:||.|:
  Rat   199 NSMVCSFLPEVIYKMRQTDQKVITALTHRPWSLSHTGDGKP-RYSVF---------WKQSVFVVL 253

  Fly   652 FLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELAGTAPHAEDFLGENASEMLRKAKDLGQIAVIW 716
            .:          .||......:..:....||.:      .:||:   :.:.|:|....|...|.|
  Rat   254 DI----------LLDWSMHNVLWYLCGISAFLM------QKDFV---SPDYLKKWSAKGIQVVSW 299

  Fly   717 GDDCNSKERVQYF-TRIGAT 735
              ..|:.:...|: :.:|::
  Rat   300 --TVNTFDEKNYYESHLGSS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 75/317 (24%)
Gde1NP_116004.2 GDPD_GDE1 68..323 CDD:176515 75/315 (24%)
Blue background indicates that the domain is not in the aligned region.

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