DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and GPCPD1

DIOPT Version :9

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_062539.1 Gene:GPCPD1 / 56261 HGNCID:26957 Length:672 Species:Homo sapiens


Alignment Length:663 Identity:198/663 - (29%)
Similarity:310/663 - (46%) Gaps:130/663 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 PTLREFNVRLEVPLAAEERLGLTGDVKALGEWQLSRSVAL----ESLDELNWQATVALQSCRQLE 228
            |:...|.:|  ..|...|...:.|...|||.|....:|||    ::.:.:.|:||:.|.....::
Human     3 PSQVAFEIR--GTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQ 65

  Fly   229 YRYF--VYVE--DLSGYKQ--IRRWETHFKPRSLGPCTELQCSQLDVFGITSDNSDLKPQVHRGW 287
            ||||  .::|  .:.|..|  :.:||||.:|||:.|                             
Human    66 YRYFKGYFLEPKTIGGPCQVIVHKWETHLQPRSITP----------------------------- 101

  Fly   288 LNHEAILQLKFNGEKMFQVHD-IETFD------PQHVQLKIVPVEKTAGLHVEYSKQEYGKSQLE 345
            |..|.|:.     :..|.:|: :||.|      ...::|::...||..   |..:|::..||:..
Human   102 LESEIIID-----DGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPP---VSITKKKLKKSRFR 158

  Fly   346 LQPTF-GVPYTKGDIVIFHITLPLERMME-----------QHFRLEC-----------YSMSN-- 385
            ::.|. |:.....|.|...:...:...:|           :|.:.||           ||:..  
Human   159 VKLTLEGLEEDDDDRVSPTVLHKMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTME 223

  Fly   386 ----ELL----------------------GSATLVTSDLT---GSEGVLHLPIKSAKNADETLAR 421
                ||:                      |:|.|::|.:.   .|.|:|.|||.| :|:.:|:.:
Human   224 PDNLELIFDFFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMS-RNSRKTIGK 287

  Fly   422 LRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGNGKS-YIADAPAERENTIASFLSAHE 485
            :|:.|:.::|......|.|::::.||....| |||||||.|.| ..|.....:||||||..:|..
Human   288 VRVDYIIIKPLPGYSCDMKSSFSKYWKPRIP-LDVGHRGAGNSTTTAQLAKVQENTIASLRNAAS 351

  Fly   486 HHADMIELDVHLTADGVPVIYHDFGLRTAPPGKQISRPDQLEYVLIKDINYELLKRLRIFSVIA- 549
            |.|..:|.||||:.|.|||:|||.........|..:.|.:|..:.:|::.::.|:.|::..|.| 
Human   352 HGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTAL 416

  Fly   550 -------GQVREYPSHNAEPRMEHRIFPTLVEVLEKLPKSLGIDVEIKW-PQRRQG-GGSEAEQT 605
                   ..|:|..|.:     |::.||:|..|||.||:.:|.::|||| .|:|.| ........
Human   417 KSKDRKESVVQEENSFS-----ENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTY 476

  Fly   606 IDKNFFADKVIHQVIQKGCGRPIIFSSFDADMCTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTR 670
            .|.|.|.|.::..|::....|.|:|||||||:|||:|.|||.:|::|||||:::.:...:|||:|
Human   477 FDMNLFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPELMDLRSR 541

  Fly   671 TFIAAVNNAQAFELAGTAPHAEDFLGENASEMLRKAKDLGQIAVIWGDDCNSKERVQYFTRIGAT 735
            |...|::.||...|.|...|.||.| .|.| .:::||..|.:...||||.|..|..:....:|..
Human   542 TTPIAMSFAQFENLLGINVHTEDLL-RNPS-YIQEAKAKGLVIFCWGDDTNDPENRRKLKELGVN 604

  Fly   736 ATCYDRSDLFMPE 748
            ...|||...:|||
Human   605 GLIYDRIYDWMPE 617

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888 32/129 (25%)
GDPD_GDE5 454..741 CDD:176549 113/297 (38%)
GDPD 458..744 CDD:281062 111/296 (38%)
GPCPD1NP_062539.1 CBM20_Prei4 4..127 CDD:99888 39/158 (25%)