DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18135 and Gde1

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_062526.1 Gene:Gde1 / 56209 MGIID:1891827 Length:331 Species:Mus musculus


Alignment Length:345 Identity:77/345 - (22%)
Similarity:134/345 - (38%) Gaps:101/345 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   426 YVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGNGKSYIADAPAERENTIASFLSAHEHHADM 490
            |:.::.:.:.|:..:.......|:...:. :.|||...    |||   |||:|:...|.::.|..
Mouse    39 YILLRFFSFEPVPSRRALQVLKPRDRVSA-IAHRGGSH----DAP---ENTLAAIRQAAKNGATG 95

  Fly   491 IELDVHLTADGVPVIYHDFGLRTAPPGKQISRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREY 555
            :|||:..|:|||||:.||..:.....|.  .|...|.:..::.:|.....|||         .|:
Mouse    96 VELDIEFTSDGVPVLMHDNTVDRTTDGS--GRLCDLTFEQVRKLNPAANHRLR---------NEF 149

  Fly   556 PSHNAEPRMEHRIFPTLVE-VLEKLPKSLGIDVEIKWPQRRQGGGSEAEQTIDKNFFAD------ 613
            |        :.|| |||.| |.|.|..:|.|..::|       |.::......||.:.:      
Mouse   150 P--------DERI-PTLKEAVTECLRHNLTIFFDVK-------GHADMASAALKNIYTEFPQLYN 198

  Fly   614 ---------KVIHQVIQ------------------KGCGRPIIFSSFDADMCTMLRFKQNVFPVM 651
                     :||:::.|                  .|.|:| .:|.|         :||:||.|:
Mouse   199 NSMVCSFLPEVIYKMRQTDQKVITALTHRPWSLSHTGDGKP-RYSVF---------WKQSVFVVL 253

  Fly   652 FLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELAGTAPHAEDFLGENASEMLRKAKDLGQIAVIW 716
            .:          .||......:..:....||.:      .:||:   :.:.|:|....|...|.|
Mouse   254 DI----------LLDWSMHNVLWYLCGISAFLM------QKDFV---SPDYLKKWSAKGIQVVSW 299

  Fly   717 GDDCNSKERVQYF-TRIGAT 735
              ..|:.:...|: :.:|::
Mouse   300 --TVNTFDEKNYYESHLGSS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 74/317 (23%)
Gde1NP_062526.1 GDPD_GDE1 68..323 CDD:176515 74/315 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.