DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18135 and gdpd1

DIOPT Version :10

Sequence 1:NP_788526.1 Gene:CG18135 / 40073 FlyBaseID:FBgn0036837 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001004118.1 Gene:gdpd1 / 445504 ZFINID:ZDB-GENE-040822-22 Length:318 Species:Danio rerio


Alignment Length:319 Identity:69/319 - (21%)
Similarity:117/319 - (36%) Gaps:94/319 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 VGHRGNGKSYIADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGLRTAPPG--- 517
            :.|||.       |....|||:|:|..|.:...||:|||.|||.|...|:.||..|:.: .|   
Zfish    41 ISHRGG-------AGENLENTMAAFKHAVKLGTDMLELDCHLTKDEQVVVLHDSSLKRS-TGINA 97

  Fly   518 --KQISRPDQLEYVLIKDINYELLKRLRIFSVIAGQVREYPSHNAEPRMEHRIFPTLVEVLEKLP 580
              ..::..|...|:....::::               |:......|   :.|| |.|.:|.|..|
Zfish    98 YVADVAYADLPPYLCKLGVSFK---------------RDCYCEGGE---DKRI-PLLRDVFEAFP 143

  Fly   581 KSLGIDVEIKWPQRRQGGGSEAEQTIDKNFFADKVIHQVIQ-----------------KGCGR-- 626
             |..::::||               ::.:....||...|||                 |.|.:  
Zfish   144 -STPVNIDIK---------------VNNDTLIKKVSELVIQYKRQDLTVWGNSSNEIVKKCHKEN 192

  Fly   627 ---PIIFSSFDADMCTMLRFKQNVFPVMFLTQGETKKWQPFLDLRTRTFIAAVNNAQAFELAGTA 688
               ||:| |....:..:..|...:.|.:.:.       :.||::...:.::.:.:.|      ..
Zfish   193 PQIPILF-SLPRVLLLLGLFYTGLLPFVPIK-------EQFLEIPMPSIVSKLKDPQ------RQ 243

  Fly   689 PHAEDFLGENASEMLRKAKDL-------GQIAVIWGDDCNSKERVQYFTRIGATATCYD 740
            ..::.|:...|.::|.: |.|       |....||  ..|.:|..|....:|||....|
Zfish   244 TRSQRFITWLADKVLMR-KSLFDHLTGRGIQVYIW--VLNDEEDFQRAFDLGATGVMTD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18135NP_788526.1 CBM20_Prei4 166..288 CDD:99888
GDPD_GDE5 454..741 CDD:176549 69/319 (22%)
gdpd1NP_001004118.1 GDPD_GDE4 12..310 CDD:176553 69/319 (22%)
Blue background indicates that the domain is not in the aligned region.

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